Gene Snas_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1287 
Symbol 
ID8882473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1364604 
End bp1366178 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content68% 
IMG OID 
Productproton-translocating NADH-quinone oxidoreductase chain N 
Protein accessionYP_003510089 
Protein GI291298811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACA TCCAACTGCC CAACATCGAC TACGCGGCCC TGTCACCGCT GCTCATCGTC 
TTGGGCGCGG CCTGCGTCGG CATCCTCGTC GAGGCCATCG CCCCCCGCAG GCTCCGGTAC
CCCATCCAGG TGCCACTCAC CCTGCTCACC CTCGTGGCGG GCCTGATCGC GGTCATCGCC
AACATCGGCA AGAACGCCCC CGTCTTCACC ACGAAGGACG GCGCCCGCGT CGACGCCGTC
GTCATCGACG GACCCGGCCT GTTCCTGTCC GGCACCATCC TCGTGCTCGG CATCGTCTCC
ACCCTGCTGA TCGCCGAACG CCGCATCGCA CCCGGCGGCG CATTCGTCGC CCACGCCGCC
GTCACCGCCG ACTCCAAGGC CGACGCCCAA CAGTCCCGCG AACCCGGCGC CTCCGAGGTC
TTCCCGCTGA CGCTGTTCTC CATCGGCGGC ATGATGCTGT TCTGCACCGC CGGGGACCTG
CTCACCATGT TCGTGGCCCT GGAAGTCTTC TCACTCCCGC TGTACCTGCT GTGCGGCCTG
GCCCGCCGCC GCCGACTCCT GTCCCAGGAA TCGGCCATGA AGTACTTCCT GCTCGGCGCG
TTCGCGTCCG CGTTCTTCGT CTACGGCGTC GCCCTCCTCT ACGGCTACGC CGAAAGCGTC
CAGCTGACCG ACATCAACGC CGCCATCCTC GACTCCGACA ACGCCGAAGT CCTGCTGCTG
GCCGGACTCG CGATGCTCAC CGTCGGCCTG CTCTTCAAGG CCGCCGCCGT CCCGTTCCAC
GTGTGGACCC CCGACGTCTA CACCGGAGCA CCCACACCCA TCACCGCCCT CATGGCCGCC
TGCACCAAGG TCGCGGCCTT CGGCGGCCTG CTGCGCGTCT TCAACGTCGC CTTCGGCAAC
GCCGGCGACC CCAACCGCAC CAGCCTGCTG TGGGAATGGG AACCCCTGCT GACCGCCGTG
GCCATCGCCA CCATGGTCGT GGGCGCCATC CTGGCCGTCA CCCAGACCGA CATCAAACGA
CTGCTGGCCT ACTCGTCCAT CGCCAACGCC GGCTACCTCC TCGTCGGCGT CATCGCCCTC
GACCAGGCCA CCGGCGCCAC CATGTTCTAC CTGGCCGCCT ACGGCTTCAC CGTCCTGGCC
GCGTTCGCCA TCGTCACCCT GGTCCGCGAC GCCGACGGCG AGGCCACCCA CCTGTCCCGC
TGGGCCGGAC TCGCGAAACG CTCACCCCGC TTCGCCGTCA TCTTCACCGT CCTCATGCTC
GCCTTCGCCG GAATCCCACT CACATCGGGA TTCGCGGCCA AGTTCGAAGT GTTCTCCTCC
GCGCTGTCGG CCGGGAACAC CGGGCTGGTC ATCGTCGGTG TGCTGTCCAG CGTCATCCTC
GCCTTCCCGT ACCTGAAGGT CGTGGTCCTG CTGTGGCTCA ACGAACCCGT CGAGGACGCA
CCAGCGGTGT CCATCCCCAG CTTCGCGACC GGAGCCGCCG TGACCGTCGG CGTCGTCGCG
ACGATCCTGC TGGGCGTCGC GCCGCAGCTG CTCATCAACG TCGTCGAGAG CGCCGGACCG
TTCCTGGCTA AATAG
 
Protein sequence
MNDIQLPNID YAALSPLLIV LGAACVGILV EAIAPRRLRY PIQVPLTLLT LVAGLIAVIA 
NIGKNAPVFT TKDGARVDAV VIDGPGLFLS GTILVLGIVS TLLIAERRIA PGGAFVAHAA
VTADSKADAQ QSREPGASEV FPLTLFSIGG MMLFCTAGDL LTMFVALEVF SLPLYLLCGL
ARRRRLLSQE SAMKYFLLGA FASAFFVYGV ALLYGYAESV QLTDINAAIL DSDNAEVLLL
AGLAMLTVGL LFKAAAVPFH VWTPDVYTGA PTPITALMAA CTKVAAFGGL LRVFNVAFGN
AGDPNRTSLL WEWEPLLTAV AIATMVVGAI LAVTQTDIKR LLAYSSIANA GYLLVGVIAL
DQATGATMFY LAAYGFTVLA AFAIVTLVRD ADGEATHLSR WAGLAKRSPR FAVIFTVLML
AFAGIPLTSG FAAKFEVFSS ALSAGNTGLV IVGVLSSVIL AFPYLKVVVL LWLNEPVEDA
PAVSIPSFAT GAAVTVGVVA TILLGVAPQL LINVVESAGP FLAK