Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1277 |
Symbol | |
ID | 8882463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1352459 |
End bp | 1353793 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | NADH dehydrogenase I, D subunit |
Protein accession | YP_003510079 |
Protein GI | 291298801 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.494921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.687145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACGA AAGAAGAGAC CACCGACGCC TACGCCGACG CCCGCGACAC CACCGAGGGC AAGGTCTTCA CCGTCACCGG CGGCGACTGG GACAGCGTCA TCGGCGGCCA CGACCCGGTC AGCGACGAAC GCCTCGTCGT CAACATGGGC CCGCAGCACC CCTCGACCCA CGGCGTTTTG CGCCTCGTGG TCGAGATGGA GGGTGAGACG GTCCGGGAAC TGCGCCCGGT CATCGGCTAC CTGCACACCG GTATCGAGAA GAACACCGAG TACCGAACCT GGACCCAGGG CACCACCTTC GTCACCCGCG CCGACTACCT GGCCCCGATC TTCAACGAGA CCGCCTACTG TCTCGCGGTC GAGAAGCTGT TGGGCATCGA GCCGCCGCAG CGCGCCACCA CGATCCGCGT GATCATGATG GAGCTCAACC GGATCGCCTC CCACCTCGTG GGTCTGGCCA CCACCGGTAT GGAGCTCGGC GCACTGTCCA TGATGATCTA CGGCTTCCGC GAGCGGGAGT ACATCCTGGA CATCTTCGAG GCCGTTTCGG GTCTGCGCAT GAACATGGCC TACGTCCGCC CCGGCGGCGT CGCCCAGGAC ATGCCCGACG AGGCGGTCAC CAAGATCCGC GACTTCCTCA AGTACATGCC CGGCTGCATC AACGACTACG AGAAACTGCT GTCGGGCAAC CCGATCTGGC AGGAACGCAC CCAGGACATC GCCTACCTGG ACGTGTCGGG CTGCCTGGCC ATGGGCGTCA CCGGACCCGT GCTGCGGGCC GCCGGACTGC CGTGGGACCT GCGCAAGACC ATGCCGTACT GCGGCTACGA GGACTACGAC TTCGAGGTCG CCACCCACAC CGGCGCCGAC GTGTGGGGCC GCTACCTGGT GCGGCTGGAG GAGATGCGGC AAAGCCTGCG CATCGTCGAG CAGGCCCTGG AGCGGCTCGA ACCCGGCCCC GTCATGGTGG AGGACAAGAA GATCGCCTGG CCCGCGCAGC TGTCGCTGGG CGGCGACGGC ATGGGCAACT CGCTGGCCCA CGTCCGCAAG ATCATGGGCC AGTCGATGGA GTCGCTGATC CACCACTTCA AGCTCGTCAC CGAGGGTTTC CGGGTTCCGC CCGGCCAGGT GTACGTCCCG ATCGAGGCGC CGCGCGGCGA ACTGGGCATC CACCTGGTCT CCGACGGCGG CACCCGCCCC TATCGGATGC ACATGCGCGA ACCCAGTTTC GTGAACCTGC AAGCCGTCCC GGCCCTGGCC GAAGGCGGCC TTCTGGCCGA CGTCATCGCG GGCGGGGCCT CACTCGACCC GGTTATGGGA GGTTGCGACC GGTAA
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Protein sequence | MTTKEETTDA YADARDTTEG KVFTVTGGDW DSVIGGHDPV SDERLVVNMG PQHPSTHGVL RLVVEMEGET VRELRPVIGY LHTGIEKNTE YRTWTQGTTF VTRADYLAPI FNETAYCLAV EKLLGIEPPQ RATTIRVIMM ELNRIASHLV GLATTGMELG ALSMMIYGFR EREYILDIFE AVSGLRMNMA YVRPGGVAQD MPDEAVTKIR DFLKYMPGCI NDYEKLLSGN PIWQERTQDI AYLDVSGCLA MGVTGPVLRA AGLPWDLRKT MPYCGYEDYD FEVATHTGAD VWGRYLVRLE EMRQSLRIVE QALERLEPGP VMVEDKKIAW PAQLSLGGDG MGNSLAHVRK IMGQSMESLI HHFKLVTEGF RVPPGQVYVP IEAPRGELGI HLVSDGGTRP YRMHMREPSF VNLQAVPALA EGGLLADVIA GGASLDPVMG GCDR
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