| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1245 |
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| Symbol | |
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| ID | 8882431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1317390 |
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| End bp | 1320866 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003510048 |
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| Protein GI | 291298770 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.275106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCG GTGTACTGGG GCCCGTGGCT GTGTGGACAG CGGACGGCGA ACCGGTCACC
GTTCCCGAGC TGAAGGTCCG CGCGCTGCTG GCGGCGCTGC TCACCGACCC CGGCCGCGTC
GTCTCCGCCG ATCGGCTCGT CGACTTCCTG TGGGACGAAC AGCCGCCCGC CAACCCCTCG
GGAGCGATCC AGACTCGGGT GTCGCGGCTG CGCAAGGTAC TGACGGCAGC GGGCGGGGCC
GAGCTCGTCG AACATCGACC GCCCGGCTAC CGGCTGGCCG TCGAGCCCGC GGACGTGGAC
GCGGGGCGGT TCACGGCTCT GGTCGGTGCG GCCCGCGACG CCGTCGATGC CCGGGGCCGT
CGGGAACTGC TCGCCGAGGC TCTCGACCTG TGGCGGGGGG AGCCGTTCGC GGACTTCGCC
GACTCGCTGT TCGTGCGGCC CGCGATCGTG CGGCTGACGG AACAGCGGTT GCTGGCGGTG
GAGGACCTGG CGCTGGCCCG GTTGGAGCTG GGCGAGCCCG GCGATGTGGT GGCGGAGCTG
GGGGACCTGG TGGGGCGGCA TCCGCGTCGC GAACGCTTGC GTGCCGTCCA TATGCGAGCG
TTGTATCTGG CGGGGCGGCA GGCCGAGGCG CTGGACAGCT TTCACGAGCT GCGGCGGCAT
CTGGGCGAGG AGCTTGGCTT GGATCCGGCG CCTGAGCTGG TGGAGCTGTA CGGCCGGATC
CTGCGGCAGG AACCGGCGAC CCGGTTCACG AGCGGCGACG AGGGATCGCG GCGGCTCGGC
CCGAGCGAGC CGACGACGTC CGAGCTAGCC TCGGCTGGAG CTGGAGCTGG AGCTGGAGCT
GGAGCTGGAG CTGGAGCTGG AGCTGGAGCT GGAGCTGGAG CTGGAGCTGG AGCTGGACGG
GGGAACTTGC CGCGACCGGT GACCGCGCTG ATCGGCCGGA GCACCGAACT GTCCGAACTG
GATCAGCTGC TGCGGGACCA TCGGCTGGTC ACCCTGACCG GCATGGGCGG CGTCGGCAAG
ACCAGCCTCG CGCTGGAGGC CGCCCGCCGG TCCGCCGAGT CTACTGCGGA CGGTACCTGG
CTGGTCGAGC TCGCCGGGCA GCCGGAGACG TCCACCGCCG CCCAGCTCGC CGAGGTCGTC
GCCGAGACGC TGGGGATCCG CGAGGACCAG TTCGCACCCC TCGGCGACCC GATCGCGACA
GTGGCTGAAG CCTTGCGCCC CAAGCGGTCA CGGCTGCTGC TGGACAACTG CGAGCACCTC
GTCGGGGCGG CCTCGGCGCT CGCGGAGGCG CTGTTGCGCG CCGCCCCGGA CCTGTCGATC
CTGGCCACCA GCCAGGAACC GCTCGGGATC GCGGGGGAGC AGCAGGTGCC GGTCAGTCCA
TTGCGGCCAC ACGACGCTGT CGAGCTGTTC ACCGCCCGCG CCCGGGGAGC CGTTCCCGGT
TTCACGGTGA CCGACGCCGC GACCCTGGCG GCCATCTGCG AACGGCTGGA CGGCATCCCG
CTGGCCCTCG AACTGGCGGC CAACCGGATC CGGGTACTCG GCCTCGACGA GCTGGCCCAA
CGACTGGCGG ACCGGTTCGG GCTGCTCACC AGCGGTCGCC GCGACGCTCC AGCCCGCCAA
CGGACCCTGC GAGCCATGCT GGACTGGAGC TGGGAGCTGC TGACCGCCGC GGAGCGGATC
GTGTTGCGGC GCTTGGCGGT TCACGCCGAT GGCTGCACGC TCGCGGCCGC CGAAGCCACG
TGCGCCGCCG AGGGCGTGCG GCCGGACGAG GTGCTGGATC TGTTGGCGCG ACTGGTGGAC
CGCTCACTGG TGAACGTCTC GTACGGCGGT GACGGCCCGC GCTACCGGCT GCTGGAGTCG
GTCGCGGCGT ACTGCGTCGA ACGCTCGCGG GCCGCCGACG ACCACGCCGC CGCTCGCAGG
GCCCACGCGC ACTATTACAT CGGCTTGGCC GAGCGCGTCG ACCCGCTGCT GCGTGGGCCC
GAACAGGAGC GGGCACTGCG GACTTTGGAC GGTGAGTCGG CCAACATTCG CGTCGCGTTC
GACACCGCCA TCGAAGCCGC CGAGCAGCCC GGCCCGTCGG CGGCGGGGTC GTCGCTGGTG
GACGCCTCGC CCGGTACCGA GCAGCCCGGC TCGGCAGCAG CAAGCCCGTC GCAAGCCGGC
GCCGCGCCCG CCGCCGAGCG GCACGCGGGC GGCACGGGCC GCGATGGCGC CACCGCCACC
GAGCAGCACG CGGTCAGCTC CGGCCACGAC GGTGCCGCCG CCGAGCCCGT CTCGGCTTTG
CGGCTCGTCA ACGCGATGAG CTGGTACTGG TTCCTGCGCG GCCGACTCGC CGAGCCCAAG
CGGATGCTGG CCAGCGTCTT GGCCCAGCCC GATCCCGGCG GGCCGCGCTA CGCGCAGGCC
GCCGTGTCGC GGTTCGCGAT CCGGTTGTTC GCCGGGGACA CCGACGTCGT CGACCCCGAG
TTCACCGCCG ATGTGGAGCG GATGCTGGAC CGTGTCACCG ATCCCGGACA GCGGGCCCGG
GCGCAGTGGT TCCTGTCGCT CGCGCTCGCC TACTTCGGGG ACTGGAACAT GTGCGAACGC
CTCCTCGGCC AGGCCACCGC CGCTTTCGAG AGCCTCGACG ACTGCTGGGG CCACGCCGCC
GTCACCTACA GCTGGGCCGA GTTCCGTTAC GACCGTGGCG AACTGGCCGC CGCCCGCCAG
CTCGGCCTGC GAGGGCTGGA CCTGTTCGTC GAGGCCGGTG ACAGCTGGGG CCGCACCCAG
GTCGAGACCC TGCTGGGCCG ACTGGCCGAG GTGGACGGTG ACTACGTCCA GGCCGCCGAA
CGACACCGCG CCGCTCTCGT CCTGGCCGAG CGACTGGGAT TGTGGTCGGC GGTGTCCATA
GGCAACAGCG AGCTGGGCCG GATCGCGCTG CTCACCGACG ATCTCGCGCA GGCTGAGCGG
CACCACGAGC AGGCTCGGCG GATCGCCATC GAGCACGCCG ACGCTCCGGG ACGCGAGTAC
GCGGAGATCG GGTTGGCGCT CGGTGCCCGG CGACAGGGCG CACTGGACGA CGCTGAGAGT
TACCTGCGAC GGTGGTTGGA CTGGAACCGG GAACTGGAGA CGGACTACGG GCTGGCCCTC
CTCCTGGCCG AACTGGGTTT CATCGCCGAG CTGCGCGGCG ACGCCGACGC GGCGTTGGAG
TGGCAGCGCG ACGGCCTCAC AGCCGCCCGG CAGACCGGCA ACCCGCGCGC GGTGGCGTTG
GCGTTGGAAG GGCTCGCCGG TGCCCGCTCC GTCGGCGGCC AGCCCGAGGT CGCCGCCCGG
CTGCTCGGTG CCGCCGCCGC GCTGCGGGAG TCGCTGGCCG CGCCGCTGCC CTCCGCCGAG
CGCCGCGATG TCGATCGTGT CACCGAGCGG CTGCGGGAAG CGTTGGGGGA CAGTCGGTTC
AAGGAACTGC TCGCCGAGGG CGCCGTTCTC GACGTGGACG GTGTCGAGGC CGGTTAG
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| Protein sequence | MRFGVLGPVA VWTADGEPVT VPELKVRALL AALLTDPGRV VSADRLVDFL WDEQPPANPS
GAIQTRVSRL RKVLTAAGGA ELVEHRPPGY RLAVEPADVD AGRFTALVGA ARDAVDARGR
RELLAEALDL WRGEPFADFA DSLFVRPAIV RLTEQRLLAV EDLALARLEL GEPGDVVAEL
GDLVGRHPRR ERLRAVHMRA LYLAGRQAEA LDSFHELRRH LGEELGLDPA PELVELYGRI
LRQEPATRFT SGDEGSRRLG PSEPTTSELA SAGAGAGAGA GAGAGAGAGA GAGAGAGAGR
GNLPRPVTAL IGRSTELSEL DQLLRDHRLV TLTGMGGVGK TSLALEAARR SAESTADGTW
LVELAGQPET STAAQLAEVV AETLGIREDQ FAPLGDPIAT VAEALRPKRS RLLLDNCEHL
VGAASALAEA LLRAAPDLSI LATSQEPLGI AGEQQVPVSP LRPHDAVELF TARARGAVPG
FTVTDAATLA AICERLDGIP LALELAANRI RVLGLDELAQ RLADRFGLLT SGRRDAPARQ
RTLRAMLDWS WELLTAAERI VLRRLAVHAD GCTLAAAEAT CAAEGVRPDE VLDLLARLVD
RSLVNVSYGG DGPRYRLLES VAAYCVERSR AADDHAAARR AHAHYYIGLA ERVDPLLRGP
EQERALRTLD GESANIRVAF DTAIEAAEQP GPSAAGSSLV DASPGTEQPG SAAASPSQAG
AAPAAERHAG GTGRDGATAT EQHAVSSGHD GAAAEPVSAL RLVNAMSWYW FLRGRLAEPK
RMLASVLAQP DPGGPRYAQA AVSRFAIRLF AGDTDVVDPE FTADVERMLD RVTDPGQRAR
AQWFLSLALA YFGDWNMCER LLGQATAAFE SLDDCWGHAA VTYSWAEFRY DRGELAAARQ
LGLRGLDLFV EAGDSWGRTQ VETLLGRLAE VDGDYVQAAE RHRAALVLAE RLGLWSAVSI
GNSELGRIAL LTDDLAQAER HHEQARRIAI EHADAPGREY AEIGLALGAR RQGALDDAES
YLRRWLDWNR ELETDYGLAL LLAELGFIAE LRGDADAALE WQRDGLTAAR QTGNPRAVAL
ALEGLAGARS VGGQPEVAAR LLGAAAALRE SLAAPLPSAE RRDVDRVTER LREALGDSRF
KELLAEGAVL DVDGVEAG
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