Gene Snas_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1236 
Symbol 
ID8882422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1309677 
End bp1310876 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510039 
Protein GI291298761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTTT CGTCCAGCCC AGCGCCCGGA CCGTTTCGGA ACGCCACCAA GCCGTCCCAG 
CGGCGGCTCA GCCCGGACCT GGCGCGCGGA TTCATGTTGT TGCTGATCGC GATGGCCTAC
GCGCCGATGC ACCTGGAGCA CAAGAACGTC GGCGGGTATG GGCAGAAGCC CGGCGGTGGG
GTCGCGGATC AGGTGATGAG TTTCCTGGCG ACGCTGTTCT TGGAGAACCG GGCGTTTCCG
TTGTTCGGGA TCATGTTCGG GGCCGGGCTG GTGATGTTGG TGTCGCGGCA GTTGAAGGCC
GGGACGCCCG AACGGGATGT GCGGCGGTTG TTGCGGCGTC GGAGCCTGTG GTTGCTGCTG
TTCGGGTTCG TGCACGCCAC CCTGGTGTTC TCCGGGGAGA TCCTGGCCGC TTACGGGGTT
GGGGGACTGG TGTTGGCCTG GTTGCTGTTT CGGGGGATGA CGGCGGTGCG GGTCGCCGCG
ATCGTCCTAT GTGTTTATTA CGGGGTCGTC GTGACGCTTG CCGCCGGTGC GATCGTGACC
GGGGCGGCGG CCAGTGCGGA GAAGGCCTCG GGGCTGCCGG GTTACACCTC GGTGCAGGAC
TGGATCGAGC GGTTGGCCGC GGCGCCGTTC GCGCCGCTGT TGAACACGCT GCTGTTTCCG
ATGTTCCTGT TGGTGGTGTT GGGGATCTGG TTCGGGAAGC GCGGGTTGCT GGACGATCCC
GCCGCGCACC GGCGGACGCT GAGGTGGCTG GCGGGGTGTG GGATCTCGGT GTCGGTGCTG
GGTGCGCTGC CGTTGGCCCT GGTCGGGGCC GGGGTGCTGG ACGTCTCGGG TTCGACGCAC
GGCTTGCTGT TCGCGGCGCA GATCCTGACC GGGGTGGCCG GGGGCGTGGG GTACGCGGCG
GCGTTCGGAT TGTTGGGGGC GCGGTTGCAG CGGCGGCCCG GGCCGGTGAC CCGGACGCTG
GCGGCGGCCG GGCAGCGGTC GTTGAGCGTG TACCTGTTCG CGTCGGTGGG GGTCGCGGTG
ATCCTGCACC CGGCGCTGTT GAACCTGGGC GCGCACACCC ATCGGGCCGG GGCCATGGCG
GTGGCCTTCG GCGTGTGGCT GGTGGCCGTG CTGTTGGCCG GACGGCTCGC CGCGGCGGGG
AGGCCGGGAC CGGCCGACGC GTTGTTGCGC GGGCTCGTCT ATCGGGGGTC GCGGCGTTAG
 
Protein sequence
MTVSSSPAPG PFRNATKPSQ RRLSPDLARG FMLLLIAMAY APMHLEHKNV GGYGQKPGGG 
VADQVMSFLA TLFLENRAFP LFGIMFGAGL VMLVSRQLKA GTPERDVRRL LRRRSLWLLL
FGFVHATLVF SGEILAAYGV GGLVLAWLLF RGMTAVRVAA IVLCVYYGVV VTLAAGAIVT
GAAASAEKAS GLPGYTSVQD WIERLAAAPF APLLNTLLFP MFLLVVLGIW FGKRGLLDDP
AAHRRTLRWL AGCGISVSVL GALPLALVGA GVLDVSGSTH GLLFAAQILT GVAGGVGYAA
AFGLLGARLQ RRPGPVTRTL AAAGQRSLSV YLFASVGVAV ILHPALLNLG AHTHRAGAMA
VAFGVWLVAV LLAGRLAAAG RPGPADALLR GLVYRGSRR