Gene Snas_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1227 
Symbol 
ID8882413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1301025 
End bp1301873 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510030 
Protein GI291298752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.352093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC TTCGGCGTCC CCGGGTCGGA CACATCGAGT TCCTTAACTG TCTGCCCATC 
TACTGGGGCT TGATGCGGTC CGGGGCCCTG ATCGATGTCG ACCTGACCCG CGACACCCCG
GTCGCGCTCA ACGACCGGCT GGTCGCCGGA GAGCTCGACA TCGCGCCGAT CAGCCTCGTG
GAGTACCTGC GGCACGCCGA CGACCTGCTG CTGTTGCCCG GACCGGCGGT CGGCAGCGAC
GGCCCGGTCC TGTCGGTCAA CATCGTCCAC GAACGCCCAC TGACCGAACT GGACGGTGCC
CGGGTCGCGC TCGGTTCGGC GTCGCGCACC GGCGTCCTGC TGGCCCGGAT GCTGCTGGCC
GACCACTACG GCATCGACGC CACCTACTTC TCCTGCGCCC CCGACGTTCC CCAGATGCTC
CGCAAGGCCG ACGCCGCCGT CGTCATCGGC GACGTCGCCC TGCGCGCCCT CTACGAAGCC
CCGGAACAGG GCCTCACCGT CACCGACCTG GGCGAACAAT GGAAAGCCTG GACCGGCCTG
CCGATGGTCT TCGCGGTCTG GGCGGTGCGC CGCGAGTTCG CCGCCGCCCA CCCTGGCCAG
GTCAAGGACG TCCACGACGC CCTCACCCGC TCGGTGTCGC TGTGCCTGGA CGAACTCGAC
ATCGTCGCCG CTTCTGCCGC CCGCTGGGAG CCCTTCGACG CGGCCACCCT CGCCGGTTAC
TTCCGTACTC TCGACTTCTC GCTGGGCGAG CGTCAGCTGA CCGGCCTGCG CGAGTTCGCC
GCCCGCGCCG CCGCCCTCGG CGAGGCCCCG CCGCTGGCCG TCGGCGGCCC GCTCCTGTTC
GAGGGCTAA
 
Protein sequence
MSGLRRPRVG HIEFLNCLPI YWGLMRSGAL IDVDLTRDTP VALNDRLVAG ELDIAPISLV 
EYLRHADDLL LLPGPAVGSD GPVLSVNIVH ERPLTELDGA RVALGSASRT GVLLARMLLA
DHYGIDATYF SCAPDVPQML RKADAAVVIG DVALRALYEA PEQGLTVTDL GEQWKAWTGL
PMVFAVWAVR REFAAAHPGQ VKDVHDALTR SVSLCLDELD IVAASAARWE PFDAATLAGY
FRTLDFSLGE RQLTGLREFA ARAAALGEAP PLAVGGPLLF EG