Gene Snas_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1191 
Symbol 
ID8882377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1277710 
End bp1278507 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID 
Product30S ribosomal protein S3 
Protein accessionYP_003509994 
Protein GI291298716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.124427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAAA AGATTCACCC ACACGGGTAC CGGCTCGGCA TCAGCTCCGG CTGGACGTCG 
CGCTGGTACG CGGACAAGAG CTACGCCGAG TACGTCGGTG AGGACGTGAA GATCCGCAAA
CTCATGTCGC AGGGCATGGA GCGCGCGGGC ATCGCCGAGG TCGACATCGA GCGCACCCGT
GACCGGGTCC GCGTCGACAT CCACACCGCC CGCCCGGGCA TCGTCATCGG CCGCAAGGGC
GCCGAGGCGG ACCGGCTGCG TACCCGGCTG GAGAAACTGA CCGGCAAGCA GGTCCAGTTC
AACATCATCG AGGTGAAGAA CCCCGAGTCC AACGCTCAGC TGGTGGCCCA GGCCATCGCC
GAGCAGCTGG CCAGCCGGGT GAACTTCCGT CGCGCGATGC GCAAGTCGAT CCAGTCGGCG
CTGCGCAACC CGACCGTCAA GGGCATCAAG GTCGCCTGCT CGGGCCGCCT CGGTGGCGCC
GAGATGTCGC GCTCCGAGTT CTACCTCGAA GGTCAGGTCC CGCTGCACAC GCTGCGCGCC
AACATCGACT ACGGCCTGTT CGAGGCCCGC ACGTCGTTCG GCCGCATCGG TGTGAAGGTG
TGGATCTACC GCGACGAGGA ACGGGCCCAG GCCCGGTCGT CGCAGGACAA CGTGCAGCGC
CGTCGCGATG ACCGCGGCGG CCGCGGTGAG CGTCGTGGCC GGGTGCGCTC GGGCGCCTCG
GGCACCATCG GCACCGGTAC CGAAGCAGGG CGTGCGGCCT CGACTAACGC CGCCGCGAAC
ACTGGTCAGG AGGGCTGA
 
Protein sequence
MGQKIHPHGY RLGISSGWTS RWYADKSYAE YVGEDVKIRK LMSQGMERAG IAEVDIERTR 
DRVRVDIHTA RPGIVIGRKG AEADRLRTRL EKLTGKQVQF NIIEVKNPES NAQLVAQAIA
EQLASRVNFR RAMRKSIQSA LRNPTVKGIK VACSGRLGGA EMSRSEFYLE GQVPLHTLRA
NIDYGLFEAR TSFGRIGVKV WIYRDEERAQ ARSSQDNVQR RRDDRGGRGE RRGRVRSGAS
GTIGTGTEAG RAASTNAAAN TGQEG