Gene Snas_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1183 
Symbol 
ID8882369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1272630 
End bp1273823 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranslation elongation factor Tu 
Protein accessionYP_003509986 
Protein GI291298708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.120688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAGG AGAAGTTCGA GCGGACCAAG CCACACGTCA ACATCGGCAC CATTGGTCAC 
ATCGACCACG GGAAGACGAC GCTGACGGCG GCTATCACCA AGGTCCTGCA CGACAAGTTC
CCCGACCTCA ACCCGTACAA GCCGTTCGAC GAGATCGACA ACGCGCCGGA AGAGAAGCAG
CGCGGTATCA CGATCTCGAT CTCGCACGTT GAGTACCAGA CTGAGACGCG GCACTACGCA
CACGTCGACT GCCCGGGGCA CGCCGACTAC ATCAAGAACA TGATCACCGG TGCCGCCCAG
ATGGACGGTG CGATCCTGGT CGTGTCGGCG ACTGACGGCC CCATGCCGCA GACCCGTGAG
CACGTGCTGC TGGCCCGCCA GGTCGGTGTT CCGTACATCG TTGTCGCCCT GAACAAGGCC
GACATGGTGG ACGACGAGGA GATCATGGAA CTGGTCGAGA TGGAAGTTCG TGAACTTCTG
TCCGACAACT CGTTCCCGGG TGACGACCTG CCGGTCGTCA AGGTCTCCGC ACTCAAGGCC
CTCGAGGGCG ACGAGCAGTG GGGCAACGCG GTCGCCGAGC TCATGAACGC CGTCGACGAG
GCGATCCCGG AGCCGGAGCG TCAGACCGAC AAGCCGTTCC TGATGCCCGT CGAGGACGTC
TTCACGATCA CCGGCCGCGG TACCGTGGTC ACCGGTCGTG TGGAGCGCGG TGTGCTGCTG
CCGAACGAGG AAGTCGACAT CGTCGGCATC AAGGAAACCA AGATCTCCAC CAAGGTCACC
GCCATCGAGA TGTTCCGCAA GGTGCTCGAT GACGCGCGTG CGGGTGAGAA CGTCGGCCTG
CTGCTGCGCG GTACCAAGCG TGACGAGGTC GAGCGCGGCA TGGTCGTCAT CAAGCCGGGC
ACCACGACCC CGCACACCGA GTTCGAGGGC CAGGTCTACG TCCTGTCCAA GGACGAGGGT
GGACGGCACA AGCCGTTCTT CTCGAACTAC CGTCCGCAGT TCTACTTCCG GACCACCGAC
GTGACCGGCG TCGTCACCCT CCCCGAGGGC ACCGAGATGG TCATGCCCGG CGACAACACC
ACCATGACGG TTGAGCTGAT CCAGCCCATC GCCATGGAGG AGGGCCTGCT GTTCGCCATC
CGCGAGGGTG GTCGTACCGT CGGTTCCGGC CGGGTCACCA AGATCCTGAA GTAA
 
Protein sequence
MAKEKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHDKF PDLNPYKPFD EIDNAPEEKQ 
RGITISISHV EYQTETRHYA HVDCPGHADY IKNMITGAAQ MDGAILVVSA TDGPMPQTRE
HVLLARQVGV PYIVVALNKA DMVDDEEIME LVEMEVRELL SDNSFPGDDL PVVKVSALKA
LEGDEQWGNA VAELMNAVDE AIPEPERQTD KPFLMPVEDV FTITGRGTVV TGRVERGVLL
PNEEVDIVGI KETKISTKVT AIEMFRKVLD DARAGENVGL LLRGTKRDEV ERGMVVIKPG
TTTPHTEFEG QVYVLSKDEG GRHKPFFSNY RPQFYFRTTD VTGVVTLPEG TEMVMPGDNT
TMTVELIQPI AMEEGLLFAI REGGRTVGSG RVTKILK