| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1129 |
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| Symbol | |
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| ID | 8882315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 1203499 |
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| End bp | 1205802 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003509932 |
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| Protein GI | 291298654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0646165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGA AACCGCGCCT GATAACAACT CTGGCCGCCT GTCTGGTCAC CGCCGCCGGG
TTGCTGGTCG CCTCCAGTGC CCAGGCCGAG GCCGCTCCGC CGCTGGGCGC GCACTATGAC
GATTCGGGGC AGAACATCAC CTTCGCCGTG CACTCGGCGG CGGCCACCCG GATGGACGTG
TACCTGTACG CCAAAGCCGA AGGCGCGGAC GAGAACCTGA AGGTCTCCCT GACCGAGGCG
TCCGACGTGT ACTCCGGTTC GGTGTCGGTC GCCGACCTCA ACGAGGCGGG TATCACCGGG
GACGTCTACT ACGGCTACCG CGCCTGGGGT CCGAACTGGA CGTTCGACGA GTCGTGGAAA
CCCGGCAGCG AGGCGGGTTT CGGCAGCGAC GTCGACGCCG ACGGCAATCG CTTCAACCCG
AACAAGCTGC TGCTCGACCC GTATACGACC GAGGTGAGTC ATGATCCGTT GCGGGACGGC
ATGACCGACG AGGGCGTCTA CGCGTCCGGG CCGGAACATC GGGTCAAGGA CAGCGGGAAG
GTCGCTCCGA AGGGGATCGT GCTGGCCGAC GCCGGTGGTG ACACCGGTTC GGCGCCGACG
CGCCCGCTGA AGGACGACGT CGTCTACGAG GTTCACCTGC GCGGCTTGAC GAAGAACGAT
CCCGACGTCC CGGAAGGTGA GCGCGGGACC TACGCCGGGG CGGCCCGCAA GGCCGCCGAG
CTGGCCGAAC TGGGGGTCAC GGCGGTGGAG TTCCTGCCGT TGGCCGAGGG ACCCAACGAC
CAGAACGACG CCACAGCCGA CAGCACCGAG GGCGACAACT ACTGGGGCTA CCAGAGTCTC
AACTTCTTCG CCCCGGATCG CCGCTACGCC AGTAACAAGA GCCCCGGCGG CCCGACGGCG
GAGTTCAAGC GGATGGTGAA GGCGTTCCAC GACGCGGGCC TGAAGGTGTT CGTCGACGTC
GTCTACAACC ACACCGGCGA GGGATACGCG TGGGAAAGCG GCGACAAGAA CACCTACAAC
CTGTTGTCCT ACCGGGGACT GGACAACCCG AGCTACTACT CGCTGACCGC TGACAAGCAG
GGCTCGTGGG ACAACACCGG CGTGGGCGGG AACTTCAACA CCTTCAACCC GGCGGCCAAG
GGCGTCATCG TGGACTCCCT GAGGTACTGG CGCGAAACCC TTGGCGTGGA CGGCTTCCGG
CACGACCTCG CGTCGGTGCT GGGCAACACC TGCCAGCACG GCTGCTTCAA GTACGAGCGC
GACAACCCCG ACACCGCGCT CAACGCGATC ACCGACGCCA TGCCCGCCCG TCCGGCCGAC
GGCGGGGCGG GGACCGACTG GATCGCCGAG CCCTGGGCCA TTGGCGACGG TACCTACCAG
GTCGGGAACT TCCCGAAGGG CTGGTCGGAG TGGAACGACA AGTACCGCGA CACCTGGCGC
GCCGACCAGA ACAAGCTCGG CGTCGAGAAG GTGACGCCGG GCCAGCTGGC GACCCGGATC
GCGGGATCGT CTGACCTGTA CGGCGACGAC GGCCGCAAAC CCTCGGCGTC GGTGAACTTC
ACCGTCGCCC ACGACGGGTT CACGCTGAAG GACCTGTATT CCTGTAACGA CAAGGACAAC
GGACAGTCCT GGCCCTACGG CCCCTCCGAC GGCGGCAGTG ACAACAACCT GTCGTGGGAC
CACGGCGGCG ATGCCGCCGC CCAGCGCCAG GCCGCGCGCA CCGGCATGGC GTCGCTGCTG
ACCTCGGCGG GAACCCCGAT GATGACCGGC GGCGACGAAC ACCTGCGTTC GGTGCGGTGC
AACAACAACC CGTACAACCT GGACTCCGAG GCCAACTGGC TCAACCATTC CCCGGACGCG
GACCAAAGCG CGTTCGGGGA CTTCACGGCC GGGATGCTGG ACTTCCGTTC GGCTCACCCC
GCACTGCGTC CGGATGACTT CTATTCCGGG TCGGACGGCA ACGGCAACGG CATGGCCGAC
CTGGACTGGT TCACCCCGGC CGGTGCGAAG CCGGACGCCG GGTACTTCGA CAGCGCCGAC
AACCACGCGC TGGGCTGGCG GCTGGACGGG ACCGAGTTCG GCGACCCGTA CGACGCGATC
TACATCGGAT ACAACGGCTG GTCCGGCAAG GTCGACTTCA CGCTGCCCGA CCCACCGCAG
GGCAAGACCT GGCACCGGGT CACCGACACC GCGTCCTTCG CCGAGGGCCC GGGACAGGTG
GCCAAGCCGG GCAGCGAGGA GAAGCTGGAC GGCGCCACCT ACGGCGTCAA CGGCCGCAGC
ATGGTGGTCC TGATCGCGAA GTAG
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| Protein sequence | MSAKPRLITT LAACLVTAAG LLVASSAQAE AAPPLGAHYD DSGQNITFAV HSAAATRMDV
YLYAKAEGAD ENLKVSLTEA SDVYSGSVSV ADLNEAGITG DVYYGYRAWG PNWTFDESWK
PGSEAGFGSD VDADGNRFNP NKLLLDPYTT EVSHDPLRDG MTDEGVYASG PEHRVKDSGK
VAPKGIVLAD AGGDTGSAPT RPLKDDVVYE VHLRGLTKND PDVPEGERGT YAGAARKAAE
LAELGVTAVE FLPLAEGPND QNDATADSTE GDNYWGYQSL NFFAPDRRYA SNKSPGGPTA
EFKRMVKAFH DAGLKVFVDV VYNHTGEGYA WESGDKNTYN LLSYRGLDNP SYYSLTADKQ
GSWDNTGVGG NFNTFNPAAK GVIVDSLRYW RETLGVDGFR HDLASVLGNT CQHGCFKYER
DNPDTALNAI TDAMPARPAD GGAGTDWIAE PWAIGDGTYQ VGNFPKGWSE WNDKYRDTWR
ADQNKLGVEK VTPGQLATRI AGSSDLYGDD GRKPSASVNF TVAHDGFTLK DLYSCNDKDN
GQSWPYGPSD GGSDNNLSWD HGGDAAAQRQ AARTGMASLL TSAGTPMMTG GDEHLRSVRC
NNNPYNLDSE ANWLNHSPDA DQSAFGDFTA GMLDFRSAHP ALRPDDFYSG SDGNGNGMAD
LDWFTPAGAK PDAGYFDSAD NHALGWRLDG TEFGDPYDAI YIGYNGWSGK VDFTLPDPPQ
GKTWHRVTDT ASFAEGPGQV AKPGSEEKLD GATYGVNGRS MVVLIAK
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