| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1124 |
|---|
| Symbol | |
|---|
| ID | 8882310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 1197117 |
|---|
| End bp | 1198370 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_003509927 |
|---|
| Protein GI | 291298649 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0301611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.175401 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGA CCGCCAATCG CCCCAAGTCG GCCCCCGACA CCGGCACCAC GTCCCCGGGC
ATGCTGCGCT CCTATGTCGA CAAGATTCGC GGCGGCGACA TCGGCGCGCT GCCCGCCGTC
ACCGGACTGG TCGTCCTGTG TGTCGTGTTC TCGATACTGC GCCCCTCGTT CTTCACCCCC
GGCAACTTCG CCAACCTCAT CCCGCAGGGA GCGGCGGTGT CGGTCATCGC CATGGGTCTG
GTGTTCGTGC TGCTCATCGG GGAGATCGAT CTGTCGGCCG GATTCGCCAG CGGCGTGTGC
GCGGCGGTGC TGGCCATCAG CCTCACCAAC TTCGGGCTGC CGTGGTTCGT GGCCGCGGCG
GCCGCGATCG CGACCGGATC ACTGCTCGGC CTGGTCCTGG GGCTGTTCGT GGCCAAGGTC
GGCATACCGT CCTTCGTGGT CACACTGGCG GCGTTCCTGG CCTTCCAGGG CGTGGTCCTG
CTGCTGGTCG AGGAGGGCAC CAACATCTCG GTCCGCAACG AGGTCATCGT CGCGATCAAC
AACGCGAACC TGCCGCCGTG GCTGGGCTGG ACGCTGGCCG TCGTGGCGGT GGCCGGGTTC
GCGGCGGTCC AGCTGACCCG CCGCCAGGGC AGGCTGCGGC GCGGACTGCG GGCCGAACCG
CTGGCGACCG TCCTGGTCAA GGTCGGTGGG CTCGCCGCGC TGCTGGGTGT CTCGGTGTTC
GTCCTGAACC TGGAACGCAG CCGCAACGTC GCCATCACCT CCCTGAAGGG GGTGCCCATC
GTGGTGCCGG TGATCGCGGT CATCCTCATC GCCGGGACGT TCCTGTTGCA CCGCACCGTC
TTCGGACGTC ACCTGTACGC GGTCGGCGGC AACCGCGAGG CCGCCCGCCG GGCCGGTATC
ACCGTCGACC GGACCCGGAT CCTGGCGTTC GTCATCTGTT CCAGCCTCGC CGCGGTCGGC
GGGATCCTGG CCGCGTCCAA GGCCACCTCG GTCGACGCCA CCACCGGCGG CAGCAACGTG
CTGTTGCTGG CGGTGGGTTC GGCGGTCATC GGCGGCGCCA GCCTGTTCGG TGGCAAGGGC
CGAATCCAGG ACGCGCTGCT GGGCGGCACA GTGGTCGCTG TAATCATCAA CGGTATGGGA
CTCTTGGACC TCGGCGCCAG CATCAAGTAT GTGGTCACCG GTTCGGTCTT GCTGCTCGCC
GCCGGAGTGG ACGTGCTGTC GCGCAGGCGG GCAGCCGCGA CAGGCAGCCT GTGA
|
|---|
| Protein sequence | MTTTANRPKS APDTGTTSPG MLRSYVDKIR GGDIGALPAV TGLVVLCVVF SILRPSFFTP
GNFANLIPQG AAVSVIAMGL VFVLLIGEID LSAGFASGVC AAVLAISLTN FGLPWFVAAA
AAIATGSLLG LVLGLFVAKV GIPSFVVTLA AFLAFQGVVL LLVEEGTNIS VRNEVIVAIN
NANLPPWLGW TLAVVAVAGF AAVQLTRRQG RLRRGLRAEP LATVLVKVGG LAALLGVSVF
VLNLERSRNV AITSLKGVPI VVPVIAVILI AGTFLLHRTV FGRHLYAVGG NREAARRAGI
TVDRTRILAF VICSSLAAVG GILAASKATS VDATTGGSNV LLLAVGSAVI GGASLFGGKG
RIQDALLGGT VVAVIINGMG LLDLGASIKY VVTGSVLLLA AGVDVLSRRR AAATGSL
|
|---|
| |