Gene Snas_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0912 
Symbol 
ID8882096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp967426 
End bp968475 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID 
Productglycine oxidase ThiO 
Protein accessionYP_003509716 
Protein GI291298438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.970325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.149805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTA CGGACATCGC GATCGCCGGG GCCGGGATCA TCGGCCTGTC GATCGCCCGG 
GAACTGACGG CGCGGGGCAT GACCGTGACC GTCCACGACC CCGAACCCGG CAGCGGCGCG
TCCACCGTGG CGGCCGGGAT GCTGGCGCCG GTGACCGAGT CGCAGTTCGG CGAGGAGCCG
CTGTCGCGAC TGTCGCTGGC CTCGGCGAAG CTGTGGCCGG AATTCGCCGC CGGGCTGGGC
ATCACCGACG CGTACCGGGA CACCGGGACG ATCTTCGTGG GCGTGGACGC CGCCGACGCC
GCCGAACTGG ACCGGCAGCT GAAGCTGTAC CGCGACTACG GGCTGGCCTG CCAGCCGCTG
TCGGCGGCCG AAGCGCGCCA GCACATCCCG CTGCTGTCGC CCAGCGTCTC CAAGGGACTG
CTCGCCGCGA CCGACCACCA GGTCGACACC CGCCGGGTCC ACGCGGCACT GCTGGAAGCC
TGCCGGGCCG CCGGGGTCAA CTTCGTTCCC CGGCGGGTCA CCGATCCGTC GACGGTCGAC
GCCGGGCTGC TGGTGGTGGC CGCGGGCAGC TGGTCGGCGA AACTGCTGGG CCTGCCGGTG
CGGCCGGTGC GCGGCCAGGT GGTGCGGTTG CGCGGCCCCG ACGAGCTCGG TTACACCGTG
CGGGCCCGGG TGCGCGGTCG CACCGTCTAC GTCGTGCCCC GCGCCTCCGG CGAGGTGGTC
ATCGGCGCCA CACAGGACGA TCGTGGCTTC GACACCGCCG CCACGGCGGG CGACACCAAC
GCGCTGCTGC GCGACACCCT CGAGGTGCTG CCGGAGCTGG CCGAATACGA GCTGGCCGAG
GTGAACGTGG GCCTGCGCCC CGGCACCCCC GACAACGCGC CGCTTCTGGG CCGCACCGCC
GATCCGCGCG TCGTCGCCGC GACCGGGCAC TTCCGGCAGG GCATCCTGCT GGCGCCGATC
ACGGCCGCAC TCATCGGGGA CCTCATCGCG ACCGGCACCG TCCCGGAGGC GCTGAAACCC
TTCGACCCCT TGCGTTTCGA CGCATCCTGA
 
Protein sequence
MTATDIAIAG AGIIGLSIAR ELTARGMTVT VHDPEPGSGA STVAAGMLAP VTESQFGEEP 
LSRLSLASAK LWPEFAAGLG ITDAYRDTGT IFVGVDAADA AELDRQLKLY RDYGLACQPL
SAAEARQHIP LLSPSVSKGL LAATDHQVDT RRVHAALLEA CRAAGVNFVP RRVTDPSTVD
AGLLVVAAGS WSAKLLGLPV RPVRGQVVRL RGPDELGYTV RARVRGRTVY VVPRASGEVV
IGATQDDRGF DTAATAGDTN ALLRDTLEVL PELAEYELAE VNVGLRPGTP DNAPLLGRTA
DPRVVAATGH FRQGILLAPI TAALIGDLIA TGTVPEALKP FDPLRFDAS