| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0882 |
|---|
| Symbol | |
|---|
| ID | 8882066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 931461 |
|---|
| End bp | 932720 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003509686 |
|---|
| Protein GI | 291298408 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.632389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGAC GCGGTTTCGT AGCGCTGGCG GCGGCGCCCG CGCTGGCCCC GCTGCTGGCC
TCGTGTGGTG GCTCGGAATC CGACGCGAAG AAGGTCGAGA TCTTCAGTTG GTGGTCCGGG
CCCGGCGAGA AAGAGGGCCT CGAAAAACTC ATCAAGATGT ACGAGGACGA CAACTCCGGC
GTGAAGGTCG TCAACAACGG CATCGCGGGG GGCGGCGGCA GTAAGGCCAA GGACCAGCTC
GCCACCCGGT TGAAGAACCA GGACCCGCCG GACTCGTTCC AGGGCCACGC CGGAGCCGAA
CTCTACGACT ACATCGACAA CAAGGTCCTC GAGGACATCA CGAAGTTCAT CAAGTCCGAG
AAACTCGACG GCGTGCTGCA CCCCGAGATC TTTAAGGGCG TGACGGTCGA CGGCAAGACC
TACTCGGTCC CGGTGAACGT GCACCGCGCG AACCTGATGT GGTACAACCC GAAGGTGCTC
GAAGAGGCCA AACTGGAGCC TCCGAAGTCC TGGACCGAGC TGATCGAACA GAACAAGAAG
CTCAAGAAGG ACGACAAGAT CACCCTCGCC GTTGGTCCGC TGTGGACGCA GATGCAGCTC
ATGGAGACCG TGCTGCTCGG CGAGTTGAAG GCCGAGGCGT ATACCGGTCT GTGGGACGGC
AACACCGACT GGGCCTCGTC CGAAGTCATC GACGCGCTCG ACCTGTTCAC CAAGGTCCTG
GAGGTCACCG ACCTCAAGAG CGCCTCGGAC GACTGGCAGC CGCAGCTGGA CAAGATGATG
AAGGGCACCG CGGCCTACGC GGTCATGGGC GACTGGGTGT ACTCCTACCT CACCTCGTCC
AAGAAGAAGG AGTACGACAA GGACTACAAG GTCGTCGTAA CACCCGGTTC CGAGGGAGTC
TTCGACTACC TGGCCGACTC CTTCACCCTG CCGGTCGGCG CCCCGCACAA GGCGAACGCC
GAAGCCTGGC TGAAGATCTG CGGCTCCAAG GAGGGCCAGA CGGTCTTCAA CCAGACCAAG
GGCTCGCTGC CGGCTCGCAC CGACATCGAG GAATCCGAGT TCACCGGTTA CCTGGCCTGG
AACTACAAGC AGTGGAAGGA CGAGAAGACC ACCGTGGTCG GCTCGCTCGC CCACGGCGCC
GTGGTGCGTC CGACCTGGAT GACCGAGATC GAGACCCTCC TGGGTTCCTT TGTCGACGAC
GGCGACTCCA AGAAGTTCGC CGACAAGATG ATGTCGACCT ACGAGAAGAC CAAGAAATAG
|
|---|
| Protein sequence | MKRRGFVALA AAPALAPLLA SCGGSESDAK KVEIFSWWSG PGEKEGLEKL IKMYEDDNSG
VKVVNNGIAG GGGSKAKDQL ATRLKNQDPP DSFQGHAGAE LYDYIDNKVL EDITKFIKSE
KLDGVLHPEI FKGVTVDGKT YSVPVNVHRA NLMWYNPKVL EEAKLEPPKS WTELIEQNKK
LKKDDKITLA VGPLWTQMQL METVLLGELK AEAYTGLWDG NTDWASSEVI DALDLFTKVL
EVTDLKSASD DWQPQLDKMM KGTAAYAVMG DWVYSYLTSS KKKEYDKDYK VVVTPGSEGV
FDYLADSFTL PVGAPHKANA EAWLKICGSK EGQTVFNQTK GSLPARTDIE ESEFTGYLAW
NYKQWKDEKT TVVGSLAHGA VVRPTWMTEI ETLLGSFVDD GDSKKFADKM MSTYEKTKK
|
|---|
| |