| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0601 |
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| Symbol | |
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| ID | 8881785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 634081 |
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| End bp | 636867 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003509408 |
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| Protein GI | 291298130 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.752855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGTAC GGCTGCTGGG ATCCGTCGAG ATCGCCAGTG CCACCGGCTG GGCGCGCGCC
GGGCCCGCCA AACGCAGCTG TGTGCTCGCC GCGCTGGCGG TCACGCCGCG CGTCCCGGTC
ACGCTGGCGA CGCTCACCGA GCGGGTGTGG GGCACCGGTG CGCCCTCGTC GGCCCACAGC
ACCCTGTACG GGCACATCGC CCACCTGCGC ACGCTCCTGC GCGACTGCCC CGGCGAGGTG
ACGCTGCGCC GTTCCGGGAT CGACGGCTAC GTCCTGGACG TCGAACCCGA ACTCATCGAC
GTGCACGCGC TGCGGTCGCT GGTGCACGCG GCCCGCGATC AGCTGCTGGT CGGGGACGGC
GAGCGGGCGG TCGAGCGGTG GCGACGCGCC GGGGAACTGG TGCGCGGCGA GGCGCTGGCC
GGGGTCAAGG GGGACTGGGC CGCCGAGGTC CGTTCGGGTC TGCGTCGCGA GCACGCGGCC
CTGCTGGCCG AGCGGTTCAC CGTCGAGCTG GAACTGAACC GGCACAACGA GATCATCGAC
GAGCTGGCCG ATCAGGTCGC GCGGCATCCG CTGTCGGAGA GCCTGGTCGA GTGCCTCATG
ACCGCGCTGT ATCGCAGCGG TCGTCCGGCC GAGGCGCTGT CGTGTTTCGC CGAGGCCCGG
TTCCGGCTGG CCGAGCGGCT CGGCGCCGAC CCCGGTACGC GGTTGCGGGA ACTGAACCGG
CGCATCCTCA AGCAGGATCC GGAACTGGCG CGGCCGACTC CCGCGTCCGC ACCGGTCGCG
CGCGGCGGGC ACCCGTTCGC GCAACTGCCC GCGGCGCCAC GGTTGTTCAC CGGACGCGCC
GCCGAACTGT CCGAACTGGA TAACGCGCTC GACGCCCCCG ACGGTGCGCG ACTGTGGACC
GTCAGCGGTC CCGGCGGCAT CGGCAAGAGC TGGCTGGCAC TGCACTGGTC GCATCGCCGT
CGCGACGCCT TCGCCGACGG CCAGCTGTAC GTCAACCTGC ACGGCTTCGA TCCCGGCACC
GCTCCGACGC CGCCGGAGAC GGCGCTGCGG GGCCTGCTGG AGACCCTGGG GGTGGCCCCC
GCGGCGATCC CGACCAGCCT GGACGCCATG TCCGGGCTGT ACCGCAGCCT GCTCGTCGGC
AAGCGGGTGC TGATCCTCGT CGACGACGCC CGCGACTCCC GGCAGGTGAT CCCGCTGCTG
CCCGGCGACG ACGCGGCGTT CACCGTCGTC ACCGGACGCC CCGGGCTCGC GACGCTGGCC
ACCTCCCACG GCGCCGCCGG ACTGCGGCTG GACACGTTGA GCCACAACGA ATCGCGCGAG
GCGTTCTCGC GGCACCTGGG GCACGACCGG ATCGCGGCGG AACCGGAGGC GACGGCCGAG
CTGGTCGGCA GCTGCGCCGG ACTGCCGCTG GCGCTGGGCA TCCTGGCCGC GCGCGCCGCC
GCCCACCCCG GCCTCCCGCT CGCCGCACTG GCGGAGTCGG TGCGCGACGA CTCCGCGCGG
CTGGACGCGC TGGACACCGG CGAGCTGTCG GCCAGCCTGC GGGCGGTGCT GGAGGGATCG
CTGGCGGCGG TGCGACCCGA GGCCGCCCGG CTGTTCGCGC TGCTGGGCCT GGCTCCCGGC
ATCGACGCCG AACGCCACGC CGTCGCCAGT CTCGCGGCGG CGTCGCTCGG CCACAGCGAC
GCGCTGCTGC GGGAACTCGA TTCCGCCAAC CTCGTCGAGC AGCGGGTTCC GGGCCGGTAC
CGGATGCACG ACCTCACCCG CTTGTACGCC GCCGAACGCG CCGAGGTCGA CCTCGACGAG
AGCGACCGCG ACGCCGCGCT GCGCCGCGTC GTCGACCACT ACCTCTACAC CGCCGCGGCG
GGCCGGGAAC TCATGCAGCG GGGACTGATT CCCCGCGACC TCGGGCAGCC GGCACCCGGT
TGTGTGACCC GTCCGCTGAC CGATCTGGAA GCCGCGAAAC GTTGGTTCGC CGCGGAACAC
GTCAACATCG TCGCGGCGCA GCGCAAGGCC GCCGAGCTCG GCTGGGACGC GTCGGTGTGG
CGGCTGGCGT GGGCACTGAC CACGTTCCAG ATCCTGCGCC GACGCAGCGA CGAGGGAGTG
CCGGTGTGGC GCCGGGCCGT CGCGGCGGCG GAAAACCTGG ACGACCTGTT CGGACAGGTG
GTCGCACACC ACACCCTCAG CCAGATGTTG ATCTACGCGG GCGACTACGA CGACGCCGCG
ACGCACGCGG CCCGCGCGCT CGACCGGGCC GAAGCCTCCG GCGACGTCCA CCAGCTCGTC
GGCGCCCACG ACGCGATGAG CAAGGCATAC GTCCGCCAGG GCGACTATCG GCTGGCGCTG
CGGCATTCCA CGCGATCCCT CGACCTGGCG CGGCGAACCG GCAACCAGAT CCTCGAAGCC
CAGGCCCACA ACTCGGTCGG CTGGCACCTG GCCCACCTGG GCGAGTACGC GGCCGCGCGA
GGCCACTGCG AGCAGGCCCT GGACAAAGCC CGCGCCATCC CCGACGACTA CCTCGCCGCG
CTCATCCTCG ACAGCCTCGG GTTCGTCGCC TCGCGCGACG ACCGGCCCGC CGACGCGTCC
GTCCACTATC GGCAGGCACT GGAGCTGGTG CGCCGTTTCG GTGCGACAGA ACAGGAACCG
ACGACCATGG TCGCGCTGGC CGAAGCCGAG GAGGCGCTGG GTCGGCGCGA CGAGGCCGAG
CGGTTGCGCC GCGAAGCCGC CGACCTGTAC GAAGCCCAGG GCTATGCCGA GGAGGCCGCC
CTGCTGCGCA AACCCGCGTC CGGCTGA
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| Protein sequence | MLVRLLGSVE IASATGWARA GPAKRSCVLA ALAVTPRVPV TLATLTERVW GTGAPSSAHS
TLYGHIAHLR TLLRDCPGEV TLRRSGIDGY VLDVEPELID VHALRSLVHA ARDQLLVGDG
ERAVERWRRA GELVRGEALA GVKGDWAAEV RSGLRREHAA LLAERFTVEL ELNRHNEIID
ELADQVARHP LSESLVECLM TALYRSGRPA EALSCFAEAR FRLAERLGAD PGTRLRELNR
RILKQDPELA RPTPASAPVA RGGHPFAQLP AAPRLFTGRA AELSELDNAL DAPDGARLWT
VSGPGGIGKS WLALHWSHRR RDAFADGQLY VNLHGFDPGT APTPPETALR GLLETLGVAP
AAIPTSLDAM SGLYRSLLVG KRVLILVDDA RDSRQVIPLL PGDDAAFTVV TGRPGLATLA
TSHGAAGLRL DTLSHNESRE AFSRHLGHDR IAAEPEATAE LVGSCAGLPL ALGILAARAA
AHPGLPLAAL AESVRDDSAR LDALDTGELS ASLRAVLEGS LAAVRPEAAR LFALLGLAPG
IDAERHAVAS LAAASLGHSD ALLRELDSAN LVEQRVPGRY RMHDLTRLYA AERAEVDLDE
SDRDAALRRV VDHYLYTAAA GRELMQRGLI PRDLGQPAPG CVTRPLTDLE AAKRWFAAEH
VNIVAAQRKA AELGWDASVW RLAWALTTFQ ILRRRSDEGV PVWRRAVAAA ENLDDLFGQV
VAHHTLSQML IYAGDYDDAA THAARALDRA EASGDVHQLV GAHDAMSKAY VRQGDYRLAL
RHSTRSLDLA RRTGNQILEA QAHNSVGWHL AHLGEYAAAR GHCEQALDKA RAIPDDYLAA
LILDSLGFVA SRDDRPADAS VHYRQALELV RRFGATEQEP TTMVALAEAE EALGRRDEAE
RLRREAADLY EAQGYAEEAA LLRKPASG
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