| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0521 |
|---|
| Symbol | |
|---|
| ID | 8881704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 546566 |
|---|
| End bp | 547237 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_003509329 |
|---|
| Protein GI | 291298051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACT GCGCATTCCC GCACGACGCG GCGGCTTACG TGCTCGGCGC GCTCGAACCC
GCTGAGCGGG AACGTTTCGA AGCCCACCTG CCCGAGTGCG AGTCCTGTGC CGCGACGGTA
CGGGAGTTCA CCGAGCTGCC GGGCGTGCTG GCCCATGCCC CGGTGGAGGA ACTGTCCGCC
GAACCGGCGC CCGAGACCCT GCTGCCCACT TTGGTGAGAA AGGTCCGAAA AGACCGACGC
CGCCGACTGT TTCGCGCCGT CGTCGTCACC GCGGCGGCCG TGGCGCTGTT CGCCGTGGGT
GCCCTCACCG CGGTGAACCT GTTCACCTCC GAGGCCACCG CGCCGTCCCT GGACGTCGCG
CTGCAACCGA TCGCGGCGGT GCAGATCACC AGCGAGGCCG GGATGATCCC CCAGAACGAG
GGCACCCGGA TCGAGCTGTC CTGCGACGAG AAGAACACGG ACGACAACCC CGACAGCGGC
TACGGCGGCA AGTACGCCTA CCGGCTCGTC GTCACCAACA CCAAGGGTGA AACCGACGTG
GCCGGCAGCT GGACCGGAGC CGACGACGGT TCCACCCGGG TGGTCCTGTT CACGCGCTGG
AAACCGCAGG ATATCGCGTC GCTGGAGATC CAGACCATGG ACAAGAAACC GATCATGCGG
TGGCGGGCCT AA
|
|---|
| Protein sequence | MSDCAFPHDA AAYVLGALEP AERERFEAHL PECESCAATV REFTELPGVL AHAPVEELSA
EPAPETLLPT LVRKVRKDRR RRLFRAVVVT AAAVALFAVG ALTAVNLFTS EATAPSLDVA
LQPIAAVQIT SEAGMIPQNE GTRIELSCDE KNTDDNPDSG YGGKYAYRLV VTNTKGETDV
AGSWTGADDG STRVVLFTRW KPQDIASLEI QTMDKKPIMR WRA
|
|---|
| |