Gene Snas_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0504 
Symbol 
ID8881687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp528215 
End bp529438 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content75% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003509312 
Protein GI291298034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.991268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACT CGCCCCCGCA CACCGGCCAG CGCCGCCTGA CCTGGCTGCG CCGCTACACC 
TGGTGGTTCC TCATCCCCTA TCCGCTGACG GCGGCCACCG TGGGGACCAT CCAGGCGATC
CGGCACGACC ATCCCGGCGG GGTGCTGGCA CTGATCCTGA TCGCCTTCGC CGTGGCGACG
GTGGTGAGCG TCCGCTGGTT CGACGCCGTG ACCCGGCACG AGGCCCGCGA CTGGCCGACG
CTCGCCGACT GGGTCCTGTT CGCCGTCGCG GCGGCCGGGC TGGCGGGCAC CGCGTGGCTG
ATCTCCCCGT TCCCGTACCG GCCGCTGGGC TGGCTGCTGC TGGCCAGCGC GCTCACCGCC
GCGGTGATCC TGCGGCTGCC CGCGCGACAC CGGCTGGCCG CGCTGGTCGT CATGACGGGG
CTGATCGCCG CCGCGACCGC GCTGCTGGCC CGCGCCGGGC TGGCCGCCCC GCTGACCGTG
CTCGGCGTCG CCGCGCTGGT GGCGTCGTTC GCGGCGATCA TCTGGGTGCA GTGGTGGAGT
TTCGACGTGG CCCGGCAGCT GGAGCAGGCC CGCAGTGTCG CGGCCGAGCT CGCGGTGACG
CGGGAGCGGC TGCGGTTCGC CGCCGACCTG CACGACATCC AGGGCCACCA CCTGCAGGTG
ATCGCGCTCA AGAGCGAACT GGCCGCGCGG CTCGGCGGCC GCGACCCCGA CAAGGCGGTG
GCGCTGATGC GCGAGGTGCA GGACCTGGCC CGCGACGCGC TGAGCGACAC CCGCGCCGTC
GTGGCGGGCT ACCGCAGTGT CTCGCCCGGC ACCGAGATCA CCAACGCCAC CAAGGTGCTG
ACGGCCGCGG GCATCGAGGC CACCGCGAAC CTGCCCGGCA CCGATCCCGG CCGGGGCTTC
GCGGGCGAAC GCGAACTCGG CCTGCTGATC CGGGAGGCGA CCACGAACAT CCTGCGGCAC
GCCCGGCCTA CCCGGGCCGA GTTCGACCTG ACGGCCACCG GCGAGGGCCT GTCGGTGCGC
ATCCGCAACG ACGGCGCCGA CTCAGGAGCC ACCAGCGGCG ACGGCACCGG CCTTGCCGGG
CTGCGCGACC GCTTCGAGGC CGTCGGCGGC AGCCTCGACT GGCGGTCCGA GGCCGGACGG
TTCACGGTCT CGGCGAGACT GCCGCGCGCG GCAGCCCCTC CCGATCCCGG CCGCTCCCCC
GACACGGAAG GATCGACGAG GTGA
 
Protein sequence
MPDSPPHTGQ RRLTWLRRYT WWFLIPYPLT AATVGTIQAI RHDHPGGVLA LILIAFAVAT 
VVSVRWFDAV TRHEARDWPT LADWVLFAVA AAGLAGTAWL ISPFPYRPLG WLLLASALTA
AVILRLPARH RLAALVVMTG LIAAATALLA RAGLAAPLTV LGVAALVASF AAIIWVQWWS
FDVARQLEQA RSVAAELAVT RERLRFAADL HDIQGHHLQV IALKSELAAR LGGRDPDKAV
ALMREVQDLA RDALSDTRAV VAGYRSVSPG TEITNATKVL TAAGIEATAN LPGTDPGRGF
AGERELGLLI REATTNILRH ARPTRAEFDL TATGEGLSVR IRNDGADSGA TSGDGTGLAG
LRDRFEAVGG SLDWRSEAGR FTVSARLPRA AAPPDPGRSP DTEGSTR