| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0476 |
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| Symbol | |
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| ID | 8881659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 496314 |
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| End bp | 497285 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003509284 |
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| Protein GI | 291298006 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00422983 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGACG TGTTTGACCC CGAATCGGAC CACGGACGTG TCTATCAGGC CTTGGTGTCC
GCGCCCCGCA GTACCGTCGA CGCGCTCGCG AGGCGCACGC TGCTGTCGCC GAGCGCGATC
CGCGACTCGC TGACGGAGTT GCAGCAGTTC GACGCCGTGA CGCCCGTCGA CTCCACCAAG
GAGGTGTGGG AGGCCCGGCG TCCCGACCTG GTGGCGGCCG AGGCGATGCG GCAGTTCGGG
GCCTGGCGCA CCCAGCTGCT GGAGGCCGAG GAACGGCTGA CCACGGCGTT TCGGTACGCG
CGCTACGAGG AGACCAGCGC GATGGACTTC GAGATCCTCA AGGGCGCCGA CGCGTTCTTC
GAGCGTTTCA AGGTCCTGCA ACCGTCGGCG CGCAGCCACG TGTGGGCCAT CGACCGGCCG
CCCTACTACT GGGAGCCGGA CGAGATCCAC CGGCAGGAAC GCATGCAGAT CGAACAGATG
GCGGCGGGGA TCACCTACCG CACCATCTAT CAGGAGTCGG AGAGCGACTC GCCGGTCCGC
AACGCCAGCA TGGCCCGATC GGTTGCCAGC GGCGAGAACG CCCGCGTCCT GGCCCGGCCG
CCGATCAAGA TGACCATCAT CGACTGTGAG GTCGGCGTCG TCGCCCTCGA CCCGCCCGAG
GGGGCCGAAG GTTCACTGTC GACACTCCTG GTGCGGCGGT CGACGCTGCT CGACGCGTTC
TGCAACATCT TCGAGTCACT GTGGAGCCTG GCGGTTCCGG TCAACCTGGA CCGGCAGAAC
CAGGAGCTCA GCAAGCGGGA GCGGGAGATA CTCACCCTGA TGGCTTCGGG TGCCGGAGAC
GACGCGATCG CCCGTCGACT GGGGGTGTCG CGCCGCACCA TCGTCCGTCA CATTGGACGA
CTGCTGGAGC ATCTGGGTTC GACCACCCGG TTCCAGGCGG GCGCCCAGGC GGCGCGGCGC
GGCTGGCTCT AG
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| Protein sequence | MFDVFDPESD HGRVYQALVS APRSTVDALA RRTLLSPSAI RDSLTELQQF DAVTPVDSTK
EVWEARRPDL VAAEAMRQFG AWRTQLLEAE ERLTTAFRYA RYEETSAMDF EILKGADAFF
ERFKVLQPSA RSHVWAIDRP PYYWEPDEIH RQERMQIEQM AAGITYRTIY QESESDSPVR
NASMARSVAS GENARVLARP PIKMTIIDCE VGVVALDPPE GAEGSLSTLL VRRSTLLDAF
CNIFESLWSL AVPVNLDRQN QELSKREREI LTLMASGAGD DAIARRLGVS RRTIVRHIGR
LLEHLGSTTR FQAGAQAARR GWL
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