Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0475 |
Symbol | |
ID | 8881658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 495411 |
End bp | 496166 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | PE-PPE domain-containing protein |
Protein accession | YP_003509283 |
Protein GI | 291298005 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.943104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00338535 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGTTGC GTGCGAAGAA GCGCACGGTG GTGGCCGTCG TGAGTGGCGT GGCCGCCGCG CTGGCGGTCG TGGCGGGCGT GCAGGTCGCG CAGGCCGATG CCCCGCAGCA CTACTACGTC GAGATCGGCG GCACCGGATC GTCGCTCAAT GCCCCCGACT GCACCAAGAC CTACGGGTTC GCCAACCAGA ACCTGGGCGG CGCGGTCGCC GTCCCGATCT GTTACCCGGC CAGCTTCGGA CCGCTACAGG GTGGGGACGG GACGATCCCG GCACCGAACG CTCCCCGCTA CGACGAGAGC GTGAAGCAGG GCGTCGAGGA GACCCTCAAG CAGATCGGCG ACATCCACCG CAACGACCCG GCCGCCACGA TCACCGTCGT GGGTTACTCG CAGGGCGCCG ACGTCGGCGA CCGGGTGCTG GAGAAGATCG CCAACGGCGA GACCGAGATC CCCGCCGAGA TCATGTCCGG CAAGCTGTAC GCCGACCCGC GCCAGCCCGA CACCGGGATC TGGGCCAAGG TCCCCGCCGG AACCAGCATC GAGGGCATCA CCTCGCCCGG CGCCGGTCCC GTCGAGTTCC CCGGCATGAC GGTGGAACGC CACTGCATCG CCAAGGACGG CGTCTGCGAC GCGACCTCGC TGGACTCCTT CCGCGGCTAC TTCCAGGACC ACCCGAAGTA CCCGGCCGAG GGCGGCATCA TCCCCAGCAC GATCACGGCC GCGCCCAACA ACGAGGTCGT CTGGCACCAG CCTTGA
|
Protein sequence | MKLRAKKRTV VAVVSGVAAA LAVVAGVQVA QADAPQHYYV EIGGTGSSLN APDCTKTYGF ANQNLGGAVA VPICYPASFG PLQGGDGTIP APNAPRYDES VKQGVEETLK QIGDIHRNDP AATITVVGYS QGADVGDRVL EKIANGETEI PAEIMSGKLY ADPRQPDTGI WAKVPAGTSI EGITSPGAGP VEFPGMTVER HCIAKDGVCD ATSLDSFRGY FQDHPKYPAE GGIIPSTITA APNNEVVWHQ P
|
| |