Gene Snas_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0475 
Symbol 
ID8881658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp495411 
End bp496166 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content69% 
IMG OID 
ProductPE-PPE domain-containing protein 
Protein accessionYP_003509283 
Protein GI291298005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.943104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00338535 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTGC GTGCGAAGAA GCGCACGGTG GTGGCCGTCG TGAGTGGCGT GGCCGCCGCG 
CTGGCGGTCG TGGCGGGCGT GCAGGTCGCG CAGGCCGATG CCCCGCAGCA CTACTACGTC
GAGATCGGCG GCACCGGATC GTCGCTCAAT GCCCCCGACT GCACCAAGAC CTACGGGTTC
GCCAACCAGA ACCTGGGCGG CGCGGTCGCC GTCCCGATCT GTTACCCGGC CAGCTTCGGA
CCGCTACAGG GTGGGGACGG GACGATCCCG GCACCGAACG CTCCCCGCTA CGACGAGAGC
GTGAAGCAGG GCGTCGAGGA GACCCTCAAG CAGATCGGCG ACATCCACCG CAACGACCCG
GCCGCCACGA TCACCGTCGT GGGTTACTCG CAGGGCGCCG ACGTCGGCGA CCGGGTGCTG
GAGAAGATCG CCAACGGCGA GACCGAGATC CCCGCCGAGA TCATGTCCGG CAAGCTGTAC
GCCGACCCGC GCCAGCCCGA CACCGGGATC TGGGCCAAGG TCCCCGCCGG AACCAGCATC
GAGGGCATCA CCTCGCCCGG CGCCGGTCCC GTCGAGTTCC CCGGCATGAC GGTGGAACGC
CACTGCATCG CCAAGGACGG CGTCTGCGAC GCGACCTCGC TGGACTCCTT CCGCGGCTAC
TTCCAGGACC ACCCGAAGTA CCCGGCCGAG GGCGGCATCA TCCCCAGCAC GATCACGGCC
GCGCCCAACA ACGAGGTCGT CTGGCACCAG CCTTGA
 
Protein sequence
MKLRAKKRTV VAVVSGVAAA LAVVAGVQVA QADAPQHYYV EIGGTGSSLN APDCTKTYGF 
ANQNLGGAVA VPICYPASFG PLQGGDGTIP APNAPRYDES VKQGVEETLK QIGDIHRNDP
AATITVVGYS QGADVGDRVL EKIANGETEI PAEIMSGKLY ADPRQPDTGI WAKVPAGTSI
EGITSPGAGP VEFPGMTVER HCIAKDGVCD ATSLDSFRGY FQDHPKYPAE GGIIPSTITA
APNNEVVWHQ P