Gene Snas_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0452 
Symbol 
ID8881634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp459484 
End bp460401 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003509260 
Protein GI291297982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0790883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTA TCCAGATAGA TCGCGTCTCC AAGTGGTTCG GCCACGTGGT CGCCGTCAAC 
GACGTGACGA TGACGGTGGC GCCGGGAATC ACCGGACTGC TGGGCCCCAA CGGGGCCGGG
AAGACCACGC TGCTCAACAT GATGGGCGGT TTCGCCGGCC CGTCCTCGGG AACCGTCACT
TTGGACGGTG TACCGACCTG GCGCAACGAG GAGATCTACC GCACCATCGG CATGGTGCCC
GAGGCCGAGG CCATGTACGA CTTCCTCACC GGGGAACAGT TCGTGCTGGC CAACGCGAAA
CTGCACGGCC TGCCCGATCC GGGTGCCGCC GCCAGGCGCG CCATCGACAC CGTCGAGATG
GCCCCGGCCG CGGGCCGCGC CATCGAGACC TACTCCAAGG GCATGCGGCA GCGCATGAAG
ATGGCCGCGG CGCTGGTCCA CGACCCGGCG GTGCTGCTGT TGGACGAACC GTTCAACGGC
ATGGATCCCC GGCAGCGGTT GCAGCTGATG GACATGCTGC GCCGTATGGG TTCCGAGGGC
CGCACGGTGC TGTTCAGCTC GCACATCCTC GAGGAGGTCG AGCAGCTGGC CACCCACATC
GAGGTGATGG TGTCCGGACG GCACGCGGCC TCCGGGGACT ACCGGGCGAT CCGGCGGCTC
ATGACCGACC GGCCGCACCG GTACACGCTG CGCAGCGACG ACGACCGGGG CCTGGCCTCG
GCGCTGGTCG CCGAGGGCGT CGTGGGCGCG GTGCAGGTCG ACGGCGAGGA CAACGCGCTG
CACGTCCAGA CCAGTGACTT CGGACGGTTC ACGGTGTCGT TGCCGAAGAT CGCCCGCGAC
AACAAGATCC GTCTCTACGA CGTCAGTCCC GCCGACGAGT CACTGGAGAG TGTCTTCGGC
TACCTGGTGA GGAGCTAG
 
Protein sequence
MSTIQIDRVS KWFGHVVAVN DVTMTVAPGI TGLLGPNGAG KTTLLNMMGG FAGPSSGTVT 
LDGVPTWRNE EIYRTIGMVP EAEAMYDFLT GEQFVLANAK LHGLPDPGAA ARRAIDTVEM
APAAGRAIET YSKGMRQRMK MAAALVHDPA VLLLDEPFNG MDPRQRLQLM DMLRRMGSEG
RTVLFSSHIL EEVEQLATHI EVMVSGRHAA SGDYRAIRRL MTDRPHRYTL RSDDDRGLAS
ALVAEGVVGA VQVDGEDNAL HVQTSDFGRF TVSLPKIARD NKIRLYDVSP ADESLESVFG
YLVRS