Gene Snas_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0421 
Symbol 
ID8881603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp429950 
End bp430792 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_003509231 
Protein GI291297953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG AGGTCGCGCC GGGTGTGCTC GTCCACCAGA GCGAACTGCT GCGGAACAAC 
ACCGTCGTCG TGCGGGGCGG CACCGGCGTG CTGCTCATCG ATCCGGGAAT CCGAAACTCC
GAGATGGCCT GCCTGGCGAA CGACCTCCGC CAGGTGGGCC AGCCCGTGGT GGCGGGTTTC
GCGACGCATC CCGACTGGGA TCACGTGCTG TGGCACCCCG AACTCGGCGG GGCGCCGCGT
TACGGCACGG CCCGGTGCGC GGCCTTCATG CGAGAGGTGC TGTCGAAACC GGACTGGAAA
TCCCACGTGG CCGCCGGGTT TCCGCCGGAG ATCGCCGACG ACCCGCCACT GGACCGGTTC
GGCCGCATCT CCGGTCTTCC CGCCGGAGCC ACGCGGATTC CCTGGGATGG CCCGGCGGTC
CGGATCATCG AGCACCCCGC GCACGCGCCG GGCCACGCGG CCCTGTTCAT CGAGGAACGC
GGCGTTCTCG TCGCCGGTGA CATGCTGTCG GATCTCTTCG TTCCGATGCT CGACGACTTC
GGCGACACCA ACGATCCGGT CGAGGAGTAC CTGGCCGGGT TGCGGCTGCT GGACGACGTG
GCGAAGGATG TCGATGTCGT CGTCCCCGGC CACGGGTCCG TCGGCACGGC CGGCGAGGTG
ACCGCGCGGA TCGCACTGGA CCGGGCGTAT GTGCTCGCCT TGCGGGACGG CGAGGCTTTC
GACGATCCGC GCGTCGGTTC ATCGGCCGAG CCCGGCTGGG AATGGATCAG CGACATCCAC
GAAGGACAAC TGCGAAACCT CGCCCGGAGG AACGAGCGCG GCGGCCGACC GGAGGCGATC
TAG
 
Protein sequence
MLTEVAPGVL VHQSELLRNN TVVVRGGTGV LLIDPGIRNS EMACLANDLR QVGQPVVAGF 
ATHPDWDHVL WHPELGGAPR YGTARCAAFM REVLSKPDWK SHVAAGFPPE IADDPPLDRF
GRISGLPAGA TRIPWDGPAV RIIEHPAHAP GHAALFIEER GVLVAGDMLS DLFVPMLDDF
GDTNDPVEEY LAGLRLLDDV AKDVDVVVPG HGSVGTAGEV TARIALDRAY VLALRDGEAF
DDPRVGSSAE PGWEWISDIH EGQLRNLARR NERGGRPEAI