Gene Snas_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0418 
Symbol 
ID8881600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp425927 
End bp426265 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003509228 
Protein GI291297950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAGT CCATGGAAGT CCGAGAGCTG GCGGAGTCCT GCCGCCTGAC CGGCAGACCC 
GAACCCCGGA TCGCGCCGCA CCCCACCACC GGCCCGACCC GCCCGGCCGC GACATCGCGC
CGGGAACCAG CCGCTCCCTC GCCCCGGGAA CGCAAACTGC TGCGGCTGTG GGCCCGCGGC
TACACCGACC AGCGCGCCGC CCGGGAACTG GAGGTCTCGC TGCGGACGGT GCGACGCATG
AGCGCCAGCC TGATGGAGCG CTACGGCGTT CACAGCCGGT TCCAGGTCGG CGGCCTGGCA
CACCAGCGCG GCTGGATCAG TCTCGAAGAC CTCTTCTAG
 
Protein sequence
MLQSMEVREL AESCRLTGRP EPRIAPHPTT GPTRPAATSR REPAAPSPRE RKLLRLWARG 
YTDQRAAREL EVSLRTVRRM SASLMERYGV HSRFQVGGLA HQRGWISLED LF