| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0402 |
|---|
| Symbol | |
|---|
| ID | 8881584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 407340 |
|---|
| End bp | 408275 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003509212 |
|---|
| Protein GI | 291297934 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCGG TGTCGGAGTT GCTGGCGGGG GTGCGGGCGC GTGGTGCCGT GTTCCGGCGG
ACGATCATGC GACCACCGTG GGCGCTGCGG GTGGCGGCTC GGACCCCGGT CACGTTGGCG
ACGATGCTGC ACAGTCACGC GTGGATAGTC CCGGACGGCC ATGAGCCGGT GCGCATCGCG
ACCGGTGACA TCGCGGTGGT GCGCGGCGAG ATCCCGTACG TGGTGGCCGA CGATCCCGCG
ACCGAGCCCG AGCTGGTGGT GACCGACGCC GACTACTGCC CAGGGTCCGG CGGGCTCGAA
CCACTGCGGC GCACCTGCGG TGACCCGAAC GAGGCGGGCG CGGTGCTGGT CAGCGGCGCG
TTCGAGCGGC AGGGTGAGCT CAGTGAGCGG CTGTTGCGGG CGCTGCCACC CGTGCTGGTG
GTCCCGGCGG CCGACAGTCC GGTGGAGTTG TTGGCCACCG AGGTGGCCCG ACAGCGGCCG
GGACAGCAGC TGGTGCTGGA TCGACTGCTG GACCTGCTGC TGGTGTCCGC GTTGCGGACC
TGGTTCGACA GTCCCGAAAC CGACGCCCCC GCCTGGTGCC GAGCGCTGGA CGATCGGGTG
GTGGGCGCGG CGTTGCGGCT TCTCCACGAG ACACCGGCGA GTCCGTGGAC GGTGTCGAAA
CTGGCGGCCG AGGTGGGAGT GTCGCGGGCG GCGTTGGCAC GGCGGTTCAC GGCTCTGGTG
GGCGAGCCGC CGATGGGCTA CCTCACCGGC TGGCGGATCG CGCTGGCCGC GGACCTGCTT
CGCCAGACCG ATCTCACAGT GGACACGATC GCCCGGCAAG TGGGTTACTC CAACGCCTTC
GCGTTGAGCG TGGCGTTCAA ACGGGTGCGG GGACTGCGTC CGGGCGAACA CCGCGACCAG
GCGAAAACCA CCCCGGCGCT GACGCCCACG CCCTAA
|
|---|
| Protein sequence | MDAVSELLAG VRARGAVFRR TIMRPPWALR VAARTPVTLA TMLHSHAWIV PDGHEPVRIA
TGDIAVVRGE IPYVVADDPA TEPELVVTDA DYCPGSGGLE PLRRTCGDPN EAGAVLVSGA
FERQGELSER LLRALPPVLV VPAADSPVEL LATEVARQRP GQQLVLDRLL DLLLVSALRT
WFDSPETDAP AWCRALDDRV VGAALRLLHE TPASPWTVSK LAAEVGVSRA ALARRFTALV
GEPPMGYLTG WRIALAADLL RQTDLTVDTI ARQVGYSNAF ALSVAFKRVR GLRPGEHRDQ
AKTTPALTPT P
|
|---|
| |