Gene Snas_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0291 
Symbol 
ID8881470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp303057 
End bp304148 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003509102 
Protein GI291297824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.822199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCTA CAGACGTCAT CTCCTTCTCT CGTGGGGCAC CCAGCCTCGA CATCGTTGAC 
ATCGAAGGTC TCAAGGCCGC CGCCGCGAAG GCCTTCGAGA CCGACCCGGC ACGCATCGCG
GGCTACGGCA CCGCCGTGGG CTACCCGCCG CTGCGCGAGT GGATCGCCGC CAAGCACAAC
GTGCCCGTCG AGCAGGTCAT CGTCACCAAC GGCTCGCTGC AGGCCGACGC GTTCCTGTTC
GACGCCCTGG TCACCCCCGA CTCCCCCGTC ATCGTCGAAC GCCCCACCTA CGACCGCACC
CTGCTGGGCC TGCGCAACCG CCGCGGCCAG CTGCACCCGG TACACGTCCA GCCCGACGGC
CTCGACGTCG CCGAACTGGC CGAGATCCTC AAGGGCGGCG TGCGTCCGAC CCTGGCCCAC
GTCATCCCGA ACTTCCAGAA CCCCGCCGGT GTCACCCTGT CCGGCCCGAA GCGCACCGAG
CTGCTGCGGC TGGCCAACGA GTACGACTTC GTGATCTTCG AGGACGACCC GTACCTGGAC
ATCCGGTTCC GGGGCGAGAA CCTGCCGACG ATGCTGGAAC TGGACGACAA CGACAAGGTC
GTGTTCGCCT CGTCGTTCTC CAAGACCATC TGCCCGGGTC TGCGCACCGG CTACCTGGTC
GGTCCCACCG ACCTGATCAA GAAGATCACG ACCATGGCCA CCAACACCTA CGTGGCGCCC
AACATGCTGG CCCAGGCCAC GGTCTACCAG TTCGCGGCCT CCGGTGCCCT GGACGCGTCG
ATCGCCAACG TCAAGAAGGC GCTGGCCGAA CGCGCCGACG CCCTCGGCGC CGCGCTGACC
AAGCACCTGC CGCAGGCCAC GTTCGTGCTG CCCGACGGCG GCTACTTCCT GTGGGTCGAC
TTCGGCGACG ACGTCGACGT CGACAAGCTG GCCCCGGCCG CCGAGGCCCG GGGGGTCCAG
GTCGTCAAGG GCACCGGTTT CGTGGTCGAC GGTGGACAGC ACAGTCTGCG ATTGGCCTAC
TCCGCGGTGT CGACCGACCG CATCGACGAG GGCGTCCGCC GCCTGGCAGC GGCCGTTGAG
GACTGTCGAT AA
 
Protein sequence
MAPTDVISFS RGAPSLDIVD IEGLKAAAAK AFETDPARIA GYGTAVGYPP LREWIAAKHN 
VPVEQVIVTN GSLQADAFLF DALVTPDSPV IVERPTYDRT LLGLRNRRGQ LHPVHVQPDG
LDVAELAEIL KGGVRPTLAH VIPNFQNPAG VTLSGPKRTE LLRLANEYDF VIFEDDPYLD
IRFRGENLPT MLELDDNDKV VFASSFSKTI CPGLRTGYLV GPTDLIKKIT TMATNTYVAP
NMLAQATVYQ FAASGALDAS IANVKKALAE RADALGAALT KHLPQATFVL PDGGYFLWVD
FGDDVDVDKL APAAEARGVQ VVKGTGFVVD GGQHSLRLAY SAVSTDRIDE GVRRLAAAVE
DCR