Gene Snas_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0265 
Symbol 
ID8881444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp278909 
End bp281749 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003509076 
Protein GI291297798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.693441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTCG GCCGCGACAG CGAGAAACGC GCGTTGGACC AGCTCCTGGC CGACGCGCGC 
GACGGACACG GTGGAGCGCT GCTGCTGCAC GGCGTCGCCG GTTCCGGGAA GACCGCGCTG
CTCGACCACG CCGCCGCTGC CGCCGGGGAG GCGCTGGTGC TGCGGGCCGC GGGCGTCCAG
ATGGAGGCCG ACCTGCCCTA CGCGGCGCTG CACATGCTGC TGCGGCCGGT GTTCGACGGC
ATCGACGCGC TGCCGCAGCC GCAGGCCGCG GCCTTGCGCT CGGCCTTCGG GCTGGGCCCG
GCCGCTGAGG CCAACCGGTT CACGGTGGGG CTGGCGACGC TGACACTGTT GGCCGAGCGG
GCCGAGTCGC GGCCGGTCGT GTGCCTTGTG GACGACGCGC AGTGGCTGGA CCTGCCGTCG
TTCCACGCGC TGCTGTTCGC CGCGCGGCGG TTCGAGGCCG ATCGGGTCGC GATGCTGTTC
GCGTCGCGGT CGTCGGGCGC CGAGCTGCGG GCCGAGGGGC TGCCGGAGCG GGAACTGTCC
GGTTTGGACC ACGACGCGTC GGTGGCGCTG CTGGAGGCGG CGGGGGTGCC AGTGCCGGTT
CGGGAGCGGC TCATCGCCGC CACCGACGGG AATCCGTTGG CGTTGCGGGA GTTGGCGCGC
GACGTCGACC GGCTGGGCGG GACAGGGCCG GTGGCGGTGC CGTTGACGAC GAAGTTGCAG
CAGCTGTTCG CGGCCGACGT GGAGTCGCTG GACGAACCGG TGCGGAACCT GCTGCTGATC
GCGGCCGCGG AGGGGACCGG GGACGTCGAG GTGGTGCTGC GGGCGGCCGA GGGGCTGGGC
ATCGGCGCGG AGGCGTTGCG GCTGGCGGCC GAGGCCGGGC ACATCGACGT CACCGCGGAC
CGGGTGTCGT TCCGGCATCC GCTGGTGCGG GCGGCGGTGT ACCAGTCGGC GACCCCGCCG
CAGCGGCGCG CGGTCCATGG CGTGCTGTCG CGGATCTTCG ACAGCGAGGA CGACGCCGAC
CGGCGGGCCT GGCACGCGGC GGCCCGCGTG TCGGGCACCG ACGACGAGGT GGCCGACGAC
CTGGCGGCCT CGGCACAGCG GGCCGCCGCG CGGGGCGGAC AGGCCGCGGC GGTGACGATC
CTGGAGCGGG CGGCGGAGCT GAGCTCGCGA CCGGGGGTGC GGGGCGGGCG GCTGGTGGCG
GCGGCCGAGG CCGCCGGTGA CAGTGGACAG CACGACCGGA CCAGGGACCT GGCGGCCCGC
GCCGAACCGC TGGTCACCGA CCCGATGCAG GCGTCGCGGC TGGCGGAGCT GCGGGCCGAG
GAGGAACTGC TGCACGGTTC GGTGGCGGCG GCGCGGGACA TCCTGGACGA AGGGGTTCGC
CGGGTGGCGG CCGTCGACGG GGGTCGCGCG GTGATCATGG TGACCCATCT GGCGAACGTC
GCGGTCCACT GGGGAGCGCC GCAGTGGGTG GACGAGGCGG TGGGGCTGTT GGGGACGATC
GAGTTCGCGG GGCGGGGATC GGACGGCGCG GGCTCGGCGG AGGTGCCACA GCGTGGGGGT
GCGGCGGCGA CCGCCGAACT CATCGTCGCG GCCGCCGCCG CGTGCGAGGG GATTCGCGAG
GTCATGGCCG GGGACGCGGG GCGGGGCGTC GAGCTGGTGC GGGCGATGGT GGAACCCATG
CGGCCGTTGC GTTCTGGGCT GGTGGGCGCG CGGGTGTTCG CCGCGACGCT GTCGGGGCTG
GCGGCGGACG ACGACGTCGC CGTGGAGCTG CTCGAACCGC TCATCACCGA GTGTCGTTCG
CTGGGCATGG TGGGGTGGCT GCCGACGCTC CACACCGGAT TGTCGGAGGC GCTGACTCGG
CTGGGCCGGT TCCGGGACGC GCGGGCCAGC GTGGCCGAGG GCGCGCGGAT CGCCGCCGAG
CTGGGGCAGA CCCGGATGGC GGCGTGCCTG GACGCGACCG GCGCGGTGCT GGCGGCCGTG
GCGGGCGAGG AGGTCACGGA CGAGCCCGGG GAGCTGTCGC CGTGGGCGCT GGCGACGTGG
CGGCACGCCC GGTCGTTGGC GGCGCTGGTG CGCGGCGACT ACGAGCTGGC CGTGGGGCAC
TGGAACTCGA TCGTGGGAAC GGCCGCCGAG CTGACGTCGG CGGCGTGGGT GTGGGCTCCC
GGGCAGGTCG AGGCGGCGGT CCGCGCCGGT GACCCGGCGG GCGCGGCCCG GGCCCACGAG
CTGTTCGCGC GGTGGGCCGA CGGCGGCGGA CGCGGTGACC TGCACGCGAT CCGACTGCGC
TGCGAGGCGC TGCTGGCCAA CGAAAGCGAA GCGGGACAAC GGTTCGAGGC GGCGCTGAAG
GCCCACGAAG CGGCGGGCCC GGCAGCGAGG GCGGGCCGAG CGGCGGGATC ACTCGCTGGC
ACTGGCAAAG CGGCTCGCTC GGCGGGGACG GGCGGCTGGG CGGCGCGGCC GTTCGACGCC
GCTCGCACGA CGCTGTTGTA CGGGGAGTGG CTGCGGCGGC ATCGGGATCG GGCGGCGGCG
CGGCGGCAGC TGCGGCGAGC CGCCGAGGAG TTCGAGCGGC TCGGGGCCGT CGGCTGGGCC
GAACGGGCGC GCCTGGAACT GCGCGCGACC GGCGAGACCC GCGCCACCAG AGCCGCCCGT
CCCGATCTGC GGGACCGGCT CACGCCACAG GAGCTTCAGG TCGTCAAACT CGCCGCCACC
GGAGCCACCA ACCGGGACAT CGGCGCCCAG TTGTTCCTCA GCCCCCGCAC CGTCGGACAC
CACTTGTACA AGGCCTTCCC GAAGCTCGGC GTGGCCAACC GCGCGGAGCT CGCGAGAGTG
TTCGCCGGGG ACGAAAGCTA A
 
Protein sequence
MLFGRDSEKR ALDQLLADAR DGHGGALLLH GVAGSGKTAL LDHAAAAAGE ALVLRAAGVQ 
MEADLPYAAL HMLLRPVFDG IDALPQPQAA ALRSAFGLGP AAEANRFTVG LATLTLLAER
AESRPVVCLV DDAQWLDLPS FHALLFAARR FEADRVAMLF ASRSSGAELR AEGLPERELS
GLDHDASVAL LEAAGVPVPV RERLIAATDG NPLALRELAR DVDRLGGTGP VAVPLTTKLQ
QLFAADVESL DEPVRNLLLI AAAEGTGDVE VVLRAAEGLG IGAEALRLAA EAGHIDVTAD
RVSFRHPLVR AAVYQSATPP QRRAVHGVLS RIFDSEDDAD RRAWHAAARV SGTDDEVADD
LAASAQRAAA RGGQAAAVTI LERAAELSSR PGVRGGRLVA AAEAAGDSGQ HDRTRDLAAR
AEPLVTDPMQ ASRLAELRAE EELLHGSVAA ARDILDEGVR RVAAVDGGRA VIMVTHLANV
AVHWGAPQWV DEAVGLLGTI EFAGRGSDGA GSAEVPQRGG AAATAELIVA AAAACEGIRE
VMAGDAGRGV ELVRAMVEPM RPLRSGLVGA RVFAATLSGL AADDDVAVEL LEPLITECRS
LGMVGWLPTL HTGLSEALTR LGRFRDARAS VAEGARIAAE LGQTRMAACL DATGAVLAAV
AGEEVTDEPG ELSPWALATW RHARSLAALV RGDYELAVGH WNSIVGTAAE LTSAAWVWAP
GQVEAAVRAG DPAGAARAHE LFARWADGGG RGDLHAIRLR CEALLANESE AGQRFEAALK
AHEAAGPAAR AGRAAGSLAG TGKAARSAGT GGWAARPFDA ARTTLLYGEW LRRHRDRAAA
RRQLRRAAEE FERLGAVGWA ERARLELRAT GETRATRAAR PDLRDRLTPQ ELQVVKLAAT
GATNRDIGAQ LFLSPRTVGH HLYKAFPKLG VANRAELARV FAGDES