Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0265 |
Symbol | |
ID | 8881444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 278909 |
End bp | 281749 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003509076 |
Protein GI | 291297798 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.693441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTCG GCCGCGACAG CGAGAAACGC GCGTTGGACC AGCTCCTGGC CGACGCGCGC GACGGACACG GTGGAGCGCT GCTGCTGCAC GGCGTCGCCG GTTCCGGGAA GACCGCGCTG CTCGACCACG CCGCCGCTGC CGCCGGGGAG GCGCTGGTGC TGCGGGCCGC GGGCGTCCAG ATGGAGGCCG ACCTGCCCTA CGCGGCGCTG CACATGCTGC TGCGGCCGGT GTTCGACGGC ATCGACGCGC TGCCGCAGCC GCAGGCCGCG GCCTTGCGCT CGGCCTTCGG GCTGGGCCCG GCCGCTGAGG CCAACCGGTT CACGGTGGGG CTGGCGACGC TGACACTGTT GGCCGAGCGG GCCGAGTCGC GGCCGGTCGT GTGCCTTGTG GACGACGCGC AGTGGCTGGA CCTGCCGTCG TTCCACGCGC TGCTGTTCGC CGCGCGGCGG TTCGAGGCCG ATCGGGTCGC GATGCTGTTC GCGTCGCGGT CGTCGGGCGC CGAGCTGCGG GCCGAGGGGC TGCCGGAGCG GGAACTGTCC GGTTTGGACC ACGACGCGTC GGTGGCGCTG CTGGAGGCGG CGGGGGTGCC AGTGCCGGTT CGGGAGCGGC TCATCGCCGC CACCGACGGG AATCCGTTGG CGTTGCGGGA GTTGGCGCGC GACGTCGACC GGCTGGGCGG GACAGGGCCG GTGGCGGTGC CGTTGACGAC GAAGTTGCAG CAGCTGTTCG CGGCCGACGT GGAGTCGCTG GACGAACCGG TGCGGAACCT GCTGCTGATC GCGGCCGCGG AGGGGACCGG GGACGTCGAG GTGGTGCTGC GGGCGGCCGA GGGGCTGGGC ATCGGCGCGG AGGCGTTGCG GCTGGCGGCC GAGGCCGGGC ACATCGACGT CACCGCGGAC CGGGTGTCGT TCCGGCATCC GCTGGTGCGG GCGGCGGTGT ACCAGTCGGC GACCCCGCCG CAGCGGCGCG CGGTCCATGG CGTGCTGTCG CGGATCTTCG ACAGCGAGGA CGACGCCGAC CGGCGGGCCT GGCACGCGGC GGCCCGCGTG TCGGGCACCG ACGACGAGGT GGCCGACGAC CTGGCGGCCT CGGCACAGCG GGCCGCCGCG CGGGGCGGAC AGGCCGCGGC GGTGACGATC CTGGAGCGGG CGGCGGAGCT GAGCTCGCGA CCGGGGGTGC GGGGCGGGCG GCTGGTGGCG GCGGCCGAGG CCGCCGGTGA CAGTGGACAG CACGACCGGA CCAGGGACCT GGCGGCCCGC GCCGAACCGC TGGTCACCGA CCCGATGCAG GCGTCGCGGC TGGCGGAGCT GCGGGCCGAG GAGGAACTGC TGCACGGTTC GGTGGCGGCG GCGCGGGACA TCCTGGACGA AGGGGTTCGC CGGGTGGCGG CCGTCGACGG GGGTCGCGCG GTGATCATGG TGACCCATCT GGCGAACGTC GCGGTCCACT GGGGAGCGCC GCAGTGGGTG GACGAGGCGG TGGGGCTGTT GGGGACGATC GAGTTCGCGG GGCGGGGATC GGACGGCGCG GGCTCGGCGG AGGTGCCACA GCGTGGGGGT GCGGCGGCGA CCGCCGAACT CATCGTCGCG GCCGCCGCCG CGTGCGAGGG GATTCGCGAG GTCATGGCCG GGGACGCGGG GCGGGGCGTC GAGCTGGTGC GGGCGATGGT GGAACCCATG CGGCCGTTGC GTTCTGGGCT GGTGGGCGCG CGGGTGTTCG CCGCGACGCT GTCGGGGCTG GCGGCGGACG ACGACGTCGC CGTGGAGCTG CTCGAACCGC TCATCACCGA GTGTCGTTCG CTGGGCATGG TGGGGTGGCT GCCGACGCTC CACACCGGAT TGTCGGAGGC GCTGACTCGG CTGGGCCGGT TCCGGGACGC GCGGGCCAGC GTGGCCGAGG GCGCGCGGAT CGCCGCCGAG CTGGGGCAGA CCCGGATGGC GGCGTGCCTG GACGCGACCG GCGCGGTGCT GGCGGCCGTG GCGGGCGAGG AGGTCACGGA CGAGCCCGGG GAGCTGTCGC CGTGGGCGCT GGCGACGTGG CGGCACGCCC GGTCGTTGGC GGCGCTGGTG CGCGGCGACT ACGAGCTGGC CGTGGGGCAC TGGAACTCGA TCGTGGGAAC GGCCGCCGAG CTGACGTCGG CGGCGTGGGT GTGGGCTCCC GGGCAGGTCG AGGCGGCGGT CCGCGCCGGT GACCCGGCGG GCGCGGCCCG GGCCCACGAG CTGTTCGCGC GGTGGGCCGA CGGCGGCGGA CGCGGTGACC TGCACGCGAT CCGACTGCGC TGCGAGGCGC TGCTGGCCAA CGAAAGCGAA GCGGGACAAC GGTTCGAGGC GGCGCTGAAG GCCCACGAAG CGGCGGGCCC GGCAGCGAGG GCGGGCCGAG CGGCGGGATC ACTCGCTGGC ACTGGCAAAG CGGCTCGCTC GGCGGGGACG GGCGGCTGGG CGGCGCGGCC GTTCGACGCC GCTCGCACGA CGCTGTTGTA CGGGGAGTGG CTGCGGCGGC ATCGGGATCG GGCGGCGGCG CGGCGGCAGC TGCGGCGAGC CGCCGAGGAG TTCGAGCGGC TCGGGGCCGT CGGCTGGGCC GAACGGGCGC GCCTGGAACT GCGCGCGACC GGCGAGACCC GCGCCACCAG AGCCGCCCGT CCCGATCTGC GGGACCGGCT CACGCCACAG GAGCTTCAGG TCGTCAAACT CGCCGCCACC GGAGCCACCA ACCGGGACAT CGGCGCCCAG TTGTTCCTCA GCCCCCGCAC CGTCGGACAC CACTTGTACA AGGCCTTCCC GAAGCTCGGC GTGGCCAACC GCGCGGAGCT CGCGAGAGTG TTCGCCGGGG ACGAAAGCTA A
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Protein sequence | MLFGRDSEKR ALDQLLADAR DGHGGALLLH GVAGSGKTAL LDHAAAAAGE ALVLRAAGVQ MEADLPYAAL HMLLRPVFDG IDALPQPQAA ALRSAFGLGP AAEANRFTVG LATLTLLAER AESRPVVCLV DDAQWLDLPS FHALLFAARR FEADRVAMLF ASRSSGAELR AEGLPERELS GLDHDASVAL LEAAGVPVPV RERLIAATDG NPLALRELAR DVDRLGGTGP VAVPLTTKLQ QLFAADVESL DEPVRNLLLI AAAEGTGDVE VVLRAAEGLG IGAEALRLAA EAGHIDVTAD RVSFRHPLVR AAVYQSATPP QRRAVHGVLS RIFDSEDDAD RRAWHAAARV SGTDDEVADD LAASAQRAAA RGGQAAAVTI LERAAELSSR PGVRGGRLVA AAEAAGDSGQ HDRTRDLAAR AEPLVTDPMQ ASRLAELRAE EELLHGSVAA ARDILDEGVR RVAAVDGGRA VIMVTHLANV AVHWGAPQWV DEAVGLLGTI EFAGRGSDGA GSAEVPQRGG AAATAELIVA AAAACEGIRE VMAGDAGRGV ELVRAMVEPM RPLRSGLVGA RVFAATLSGL AADDDVAVEL LEPLITECRS LGMVGWLPTL HTGLSEALTR LGRFRDARAS VAEGARIAAE LGQTRMAACL DATGAVLAAV AGEEVTDEPG ELSPWALATW RHARSLAALV RGDYELAVGH WNSIVGTAAE LTSAAWVWAP GQVEAAVRAG DPAGAARAHE LFARWADGGG RGDLHAIRLR CEALLANESE AGQRFEAALK AHEAAGPAAR AGRAAGSLAG TGKAARSAGT GGWAARPFDA ARTTLLYGEW LRRHRDRAAA RRQLRRAAEE FERLGAVGWA ERARLELRAT GETRATRAAR PDLRDRLTPQ ELQVVKLAAT GATNRDIGAQ LFLSPRTVGH HLYKAFPKLG VANRAELARV FAGDES
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