Gene Snas_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0238 
Symbol 
ID8881416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp253733 
End bp254998 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509050 
Protein GI291297772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.817468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAT TCGCGCGATT CCGGATGCGC GCCAGCCAAA CCTGGGCACG TCTGCGTACG 
AACCCCTATG TGGAGCGTTA CGAGCAGGTC CGGCGCCGCA ACGAGGATCC CGAGCTCGAC
GACGTCCCCG ACGAGGTGGA GGAGGAGTTC GCCGACGCCG ACGAGGTCGA ACCGCCCGAC
CCCGAGGGCG TGCCGCACGG CGTGAAGGTC GCCGCGGGCT GGTCCTGGCG GGCACTGGTC
ATCGCCGCCG CCGTGGTCGG CGTGCTGTAC CTGGCCAGCA TCCTGTCCTT CGTCGTGATC
CCGATCCTGG TGTCGCTGCT GCTGGCCGCG ATGCTGCAAC CCCTGGTCGC GCTGCTGGTC
AAGGCGCACG TACCCCGCTC CATCGCCGCC GCGATCGTCC TCATCGCCGG TATCGCCGCC
GTGGCGGGCG TGCTGACCCT GGTCATCAAC CAGTTCGTCG CCAACATCGA CACCCTCGTC
GACAGCGTCC AAAAGGGTCT GCTCAATCTC CAGGACTGGG CCAAATACGG ACCGCTGCAC
CTGGAACAGA AGCAGATCAA CAACTTCTTC AGCGAGTTCC AGACCGTCAT CACCGACTGG
CTGTCCGACA ACCAGTCCAT TCTGGCCGGT ACCGCCGTCG AGAGTCTCGG CATCGTCTTC
AACATCCTGA CCGGCGCGTT CCTGGTGCTG TTCACCACCT TCTTCTTCAT GCGCGACGGC
CGCCGCATCT GGACCTTCCT GGTGCGGATG CTGCCCGAAC GCGCCCACGA ACCGTTGCTG
CACGCGGGTT TCGCGTCCTG GCGGACCCTG GTGTCGTTCG TGCGCGCCAC GATCCTGGTC
GCGTTCATCG ACGCCGTCGG TATCGGCGCC TGGCTGATGT TCCTGGACAT CGAACTGGCC
ATCCCGCTGG CGGCCCTGGT GTTCCTGGGC GCCTTCATCC CCATCATCGG TGCCACCGTG
TCGGGGATCG TCGCCGTGCT GGTCGCCCTG GTCGGCGACG ACTGGGTGAC GGCGCTGCTG
GTGCTGGCCG GGGTCATCGT CGTGCAACAG GTCGAAGGCC ATCTGCTGCA ACCGCTGCTG
ATGGGCCGCG CCGTCAGCGT CCACCCGCTG GCGATCGTGC TCGCCGTGGC CGCCGGAGTC
GTGCTGGCCG GACCGATCGG CGCGCTCATC GCGGTGCCCA TCGTCGCCGT CCTCAACAAC
GGCATCAAGG CGCTGCGCGC CCACGCACAT CCACCGGATG AGACACCGGG TAACGTCGCG
GCGTGA
 
Protein sequence
MSRFARFRMR ASQTWARLRT NPYVERYEQV RRRNEDPELD DVPDEVEEEF ADADEVEPPD 
PEGVPHGVKV AAGWSWRALV IAAAVVGVLY LASILSFVVI PILVSLLLAA MLQPLVALLV
KAHVPRSIAA AIVLIAGIAA VAGVLTLVIN QFVANIDTLV DSVQKGLLNL QDWAKYGPLH
LEQKQINNFF SEFQTVITDW LSDNQSILAG TAVESLGIVF NILTGAFLVL FTTFFFMRDG
RRIWTFLVRM LPERAHEPLL HAGFASWRTL VSFVRATILV AFIDAVGIGA WLMFLDIELA
IPLAALVFLG AFIPIIGATV SGIVAVLVAL VGDDWVTALL VLAGVIVVQQ VEGHLLQPLL
MGRAVSVHPL AIVLAVAAGV VLAGPIGALI AVPIVAVLNN GIKALRAHAH PPDETPGNVA
A