Gene Snas_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0236 
Symbol 
ID8881414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp252135 
End bp253073 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content73% 
IMG OID 
ProductPrephenate dehydrogenase 
Protein accessionYP_003509048 
Protein GI291297770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG GGGTGGTGGG GCTCGGCCTG ATCGGCGGCT CGCTGTTGCG GCGCGCGCAC 
GCGGCGGGTT TCCGGGTGAG TGGCTTCGAC GCGGATGCCG CGACCCGGGA GGCGGCGCGA
CAGGCGGGGT ACGAGGTCGC CGACGCACTC GCGGGACTCG CTGACGCGCG ACTGTTGGTG
CTGGCCGTGC CGTTGCCCGC TTTGGCGACG GTGCTGCCCG AGCTTTCGGG TTACGGCGGG
CTGCTCACCG ATGTCACCTC GGTCAAGGAA CCGGTGACGC GGCTGGTGGC CCGGCACTGT
CCGAGTGTGC GGTTCGTCGC CGGGCATCCG ATGGCGGGCA AGGAGACCAG CGGGTTCGCG
GCCGCAGACG CCGACCTGTT CGAGGGCCGG GTGTGGGTGG CCTGCCTGGA TGAGGACACC
GACCTGGACG ACTGGCTGCG GCTGGCCGAG ACCGCCTGCG CGCTGGGGGC TCGGGTGGTT
CCGGCGACCG TCGCCGAGCA CGACACCGCC GCGGCCCGGA TCAGTCACGT CCCGCATGTG
CTGGCGGCCG CGTTGTCGCT GCTGGCCGCC GATCCGCTGT CGCGGGCGCT GGGGGCGGGT
TCCTTCGCCG ACGGGACCCG GGTGGCGCAG TCGAGTCCGG AACTGGCCGC CGCGATGTGC
GCCGGGAACG CCGGTCCGGT GGCCGCCGAA CTGCGGCGGC TCGTCGAGGA ACTGGCCGAG
GCCGGTAACC GGCTGGGCGA TCATGACGCG TTTCGCGACT GGTACGCGGG CGCGCGGGAG
CTTCGGGTCG ACTGGCCGCC GGAGCCGGGA GACGTCCGGC GGTTGCCGGT CACGACGGAG
GATCTCCTGT CGCTGGGCCG CGCGGGCGGA TGGGTTACCG AGGTGGATCG CGGCACTCGA
TCCGTAATGG TGAGGCAGCC GCAGGTCTCG GTGGCGTAG
 
Protein sequence
MDIGVVGLGL IGGSLLRRAH AAGFRVSGFD ADAATREAAR QAGYEVADAL AGLADARLLV 
LAVPLPALAT VLPELSGYGG LLTDVTSVKE PVTRLVARHC PSVRFVAGHP MAGKETSGFA
AADADLFEGR VWVACLDEDT DLDDWLRLAE TACALGARVV PATVAEHDTA AARISHVPHV
LAAALSLLAA DPLSRALGAG SFADGTRVAQ SSPELAAAMC AGNAGPVAAE LRRLVEELAE
AGNRLGDHDA FRDWYAGARE LRVDWPPEPG DVRRLPVTTE DLLSLGRAGG WVTEVDRGTR
SVMVRQPQVS VA