Gene Snas_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0231 
Symbol 
ID8881409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp245946 
End bp247217 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID 
ProductGlycine hydroxymethyltransferase 
Protein accessionYP_003509043 
Protein GI291297765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.681161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA GCAAGAACCT GATGCGGCGA CTGGTGGAGG CCGACAGTGA GGTGGCCCAG 
CTGATCGACG CGGAGGGGCG TCGGCAGCAC GACAAGATCC GGTTGATCGC CAGCGAGAAC
TACGTGTCGC AGGCCGTCAT GGAGGCCACC GGGACGCTTC TGACCAACAA GTACTCCGAG
GGCTACGCGG GGAAGCGCTA CTACGAGGGC CAGCAGCTCA TCGACGAGGT CGAGGAGCTG
GCGATCTCGC GCGCCAAGTC GCTGTTCGGG GTCGACCACG CCAACGTGCA GCCGTACTCG
GGTTCGCCCG CCAACCTCGC CGTCTACCTG GCGTTCGCGC AGCCGGGCGA CACGGTCATG
GGCATGTCGC TGCCGATGGG CGGGCACCTG ACCCACGGCT GGAGCGTCTC GGCGACCGGC
AAGTGGTTCA ACGCCGTCCA CTATGGCGTC CGCAAGGACA CCGGCCGGGT CGACTTCGAC
GAGGTCGCTG AACTGGCCCG CCAGCACCGC CCCAAGCTGA TCTTCTGCGG CGGCACCGCG
ATCCCGCGCA CCGTCGACTT CGCCGCCTTC GCCAAGATCG CCCAGGAGGT GGACGCGATC
CTGGTGGCCG ACATCGCGCA CATCGCGGGT CTGGTCGCCG GTGGCGCGCA CCCCTCGCCG
GTGGGGCACG CCGAGGTCGT CACGACCACC ACCCACAAGA CGCTGCGGGG CCCGCGCGGC
GCCATGCTCA TGTCGACCGA GGAACGCGCC AAGGCGCTGG ACAAGGCGGT CTTCCCCGGC
CTCCAGGGCG GACCCCACAA CCACACCACC GCCGCGATCG CGGTGGCGCT GCGGGAAGCG
GCCACCCCGG ACTTCGCCGA CTACGCGACC CGGATCGTCG CCAACGCCAA GGCGCTGGCG
GCGGCCCTGA CCGAGCGCGG TTTCGACCTG GTCTCGGGCG GCACCGACAA CCACCTGATC
CTGGCCGACC TGACCAGCAA GGACATCGGC GGCAAACCGG CCGCCAAGGC CCTGGACCGG
GCCGGGGTCG AACTGAACTT CAACACCGTC CCGTTCGACC CGCGTAAGCC CTTCGACCCC
TCGGGTCTGC GCATCGGCAC CGCCGCCGTC ACCACCCGCG GCATGACCGA GGCCGACATG
CCCAAGATCG CGGCCTGGAT GGACGACGCG ATCTCGGCGG CCCACGACGG CCAGGAGGAC
AAACTGGACG ACATCGCGGG CCAGATCCGC GACTTCTGCG CCGCCTACCC GATCCCGGGC
TGGACCGAGT AA
 
Protein sequence
MSDSKNLMRR LVEADSEVAQ LIDAEGRRQH DKIRLIASEN YVSQAVMEAT GTLLTNKYSE 
GYAGKRYYEG QQLIDEVEEL AISRAKSLFG VDHANVQPYS GSPANLAVYL AFAQPGDTVM
GMSLPMGGHL THGWSVSATG KWFNAVHYGV RKDTGRVDFD EVAELARQHR PKLIFCGGTA
IPRTVDFAAF AKIAQEVDAI LVADIAHIAG LVAGGAHPSP VGHAEVVTTT THKTLRGPRG
AMLMSTEERA KALDKAVFPG LQGGPHNHTT AAIAVALREA ATPDFADYAT RIVANAKALA
AALTERGFDL VSGGTDNHLI LADLTSKDIG GKPAAKALDR AGVELNFNTV PFDPRKPFDP
SGLRIGTAAV TTRGMTEADM PKIAAWMDDA ISAAHDGQED KLDDIAGQIR DFCAAYPIPG
WTE