Gene Snas_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0174 
Symbol 
ID8881351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp176363 
End bp177583 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content72% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003508987 
Protein GI291297709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TGCGCCCCTC CGGACGGTTC CCCGCCCAGG CAGCCAACAC CCCCGGCCAC 
CTGCTGAACC TCATCCGCAG CCGCGACAAC TGGACCCGGC AGCAACTCCT GACCGCCACC
GGCCTGTCCC GCACCACCCT GTTCTCCCGC CTCGGCCAGC TCTTCCGCTC CGGCTACGCC
TACGAGTCCG GCGCCGCCCG CTCCACCGGC GGCCGCCCCT CCAGCCTGGT CCGCTTCGAA
GACCGCGGCC GCGTCGTCCT CGTCATCGAC CTGGGCCACC GCCACGGTCG CATCGCGATC
ACCACCGTCG GCGGCACCAC GCTGCGCGAG ACCCGACTGT CCATCGACAT CGCCCAACCC
CCCAAGACCC TGCTGCCGAC CATCTACGAC CAGGCCCAAC ACCTGCTCGA CACCGGCACC
GACGAGAAAC TCGTCGGCGT CGGCGTCGCG GTACCCGGCC CGGTCTCACC CGTCACCGGG
CACCTCACCG AAACCACGAT CATGCCCGGC TGGCACCACT ACCCCCTCAA CGCCGAGATG
GCCGACCGCT GGGGCGTCCC GGTCCTGCTG GAGAACGACG CCCGGGCCTA CGCCCTCGGC
GAATCCGTCG AACGCCCCGA CGCGAGCCCT CTGGTCGCGG TCAAATACGC CAACGGCATC
GGCGCCGGAA TCGTCCTGGA CGGCCAACTC CTGTGCGGCG TGGGCGGGGC CGCCGGCGAC
ATCGGCCACA TCCGCATCAC CGACGCCCGC GGTCGCCGCT GCCGCTGCGG CCGCAACGGC
TGCCTCGCCG CCTACGCGTC CGGCCACGCC CTCCTACGCC AACTCCGCCG CCCCACCGAC
ACCACGGTCG ACGACCTGGC CACCACCATG GCCACCCACC AACCCACCGA AACCGCGGTC
CGCGCCGCCG CCACCCTCCT GGGCCGCACC CTCGCCAGCC TCGTCGCCAC CCTCAACCCC
CAGCTCATCG TCCTGGGCGG AGTCCTGGGC CGCACCCCCG CCGTAGTGGA AGAAGTCCGC
TCCCAAATCC ACACCCTCGC CATCGACCGA GTCACCACCC CCCTCTCCGT CACGGCCAGC
ACGGCCCACC ACCCGGTCGG CACCGGCCTC ACCGCCCTGG TTACGGGCCA CGTCTACGCC
CCCGACAACG TCGACGCCAC CCTCACCGCC CAACCGACCA CGGCCGATAC CCGGTCGACA
CCGCCCCACC GAGCCCCGTA A
 
Protein sequence
MTAMRPSGRF PAQAANTPGH LLNLIRSRDN WTRQQLLTAT GLSRTTLFSR LGQLFRSGYA 
YESGAARSTG GRPSSLVRFE DRGRVVLVID LGHRHGRIAI TTVGGTTLRE TRLSIDIAQP
PKTLLPTIYD QAQHLLDTGT DEKLVGVGVA VPGPVSPVTG HLTETTIMPG WHHYPLNAEM
ADRWGVPVLL ENDARAYALG ESVERPDASP LVAVKYANGI GAGIVLDGQL LCGVGGAAGD
IGHIRITDAR GRRCRCGRNG CLAAYASGHA LLRQLRRPTD TTVDDLATTM ATHQPTETAV
RAAATLLGRT LASLVATLNP QLIVLGGVLG RTPAVVEEVR SQIHTLAIDR VTTPLSVTAS
TAHHPVGTGL TALVTGHVYA PDNVDATLTA QPTTADTRST PPHRAP