Gene Snas_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0161 
Symbol 
ID8881338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp164330 
End bp164950 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003508974 
Protein GI291297696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA ACAGCCGTCG TCGCGGCCGT CCCGCGACCG GAGTGCGCGA AGCGGTGCTG 
GCCGCCACCG AGGAGATCCT GGCCGAGTCC GGTGTCGCCC GGCTGTCGAC CAAGGAGATC
GCCAAGCGCG CGTCGGTGGC CGAGTCGAGC ATCTTCTACC ACTTCAACGA CCGGCTGGGA
CTGCTCAAGG CCGTCGTCGA CACGCACCGG CCCGGGTTCC GCCAGACGCT GGCCGAGATC
CGCGCGGGCG GCGGCAGCGG CGAACTGCGC GCCGACCTGG TGGCGCTGCT GGAAAGCCTG
GAGGCGTTCT ACCTGCGCAT CACGCCGATC CTGGCGGCGG TGCAGTCCGA CGGTGAGCTG
CGCGGCCGGT TCTCCGATCG CGGTGCCTCC GAGGAGATCG GGCCCCGTCG GGGCGTCACG
GCACTGGCGG AGTACCTGGA CGCCGAGCGC GCGGCGGGCC GGGTCCGCAG GGACCTGGAC
AGCCTCGCGA TCGCGCAACT GCTGACGGGC GTGGCGTTTC AGCGGGCGGC GCTGATCCGG
TTGTCCGGCC CCGAGGGGGT ACCGCCGGGC GGCGTGGAAC CCATTGTGGA CGCACTGTTG
CCGAGCCTGG TCAAGCCCTA G
 
Protein sequence
MTDNSRRRGR PATGVREAVL AATEEILAES GVARLSTKEI AKRASVAESS IFYHFNDRLG 
LLKAVVDTHR PGFRQTLAEI RAGGGSGELR ADLVALLESL EAFYLRITPI LAAVQSDGEL
RGRFSDRGAS EEIGPRRGVT ALAEYLDAER AAGRVRRDLD SLAIAQLLTG VAFQRAALIR
LSGPEGVPPG GVEPIVDALL PSLVKP