Gene Snas_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0116 
Symbol 
ID8881293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp124233 
End bp125096 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508930 
Protein GI291297652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.307461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0664489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGAC GCACTCCGCT GACGGCCGCC GCGTGCCTGG CCGTCCTGGC GGTATCCGCC 
CCCGCCCCCG CCTTCGCCCA CTCCGCCCCC ATCGACGAGT ACGTCGCCCT CGGCGACTCG
TCCGTCGCCG GTCCCCTCAT CCCCGACTGG GACACCGGTG AACCCGGTTG CCTCCGCTCC
ACGAACAACT GGGCCGTCGA AGTCGCCGAC GAACTCGGCG TCGCGAACCT GACCGACGTC
AGCTGCTCGG CGGCCACCGC CGAACACATG GCCAATCCGC AGTCACTGCC GCTGGGCGGC
AGCGCGCCGC CGCAGTTCGA CGCGCTGTCC GACACCACCG ACCTGGTGAC CACCACCATC
GGCGGCAACG ACGTCGGGCT GGTCGGCGAG GCCCTGAAAT GCGTGAACCT GCTGCCCGAA
CCCGCCGGAC AGTCCTGTAA GGACCGACTG ACCTCGGGTG GCGTCGACCA GCTCGCCGCC
AAGATCGACG CCTTCGAACC GGCCTTCGGC GAGATGCTGG ACGGCATCCG CGAACACGCC
CCCAACGCCC GCGTCGTCGT GGTGGGTTAC GGCACCTACA TCCAGCCCGG CGGCTGCTAT
CCCGAGACGC CGGTGTGGAG CCGCGACGCG GACTACCTCC AGGACACCAT CGGCAGGCTC
GACGACATGA TGGCCCGTCA GTCGGCCGAA CACGGCGTCG AGTTCATCGA CATCCGCGAG
GCCACGAAGG GCCGCAACCT GTGCGCCCCC ACCGGAACCC GCTGGTACGA GTCGCTGATC
CCGACCTCCC CGGCGACACC GTTGCACCCC AACCGGATCG GCATGACCGG TATCGGCGAG
GCCGTCGCCG CCGAACTGCG CTGA
 
Protein sequence
MRRRTPLTAA ACLAVLAVSA PAPAFAHSAP IDEYVALGDS SVAGPLIPDW DTGEPGCLRS 
TNNWAVEVAD ELGVANLTDV SCSAATAEHM ANPQSLPLGG SAPPQFDALS DTTDLVTTTI
GGNDVGLVGE ALKCVNLLPE PAGQSCKDRL TSGGVDQLAA KIDAFEPAFG EMLDGIREHA
PNARVVVVGY GTYIQPGGCY PETPVWSRDA DYLQDTIGRL DDMMARQSAE HGVEFIDIRE
ATKGRNLCAP TGTRWYESLI PTSPATPLHP NRIGMTGIGE AVAAELR