Gene Snas_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0108 
Symbol 
ID8881285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp116485 
End bp116988 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508922 
Protein GI291297644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.630675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATCC TGGCCGAGAG GCTCGACAGC CTCAGCATCG AGACGTCGTC ACCGGACGGC 
CAGATCACGG GCGTGTTCCG GCCGACCTCC GCACTGAGCG TCCACTTCCG CGACGGCGGC
TACCGCGGCT ACACCGAACG CGGCCTGGAA CGTCAGCTGG CCGCGCTCGT CGCCTCGGCG
TGGGCCCGGT ACTGGCGGGC CCGGCAGGCG GCGGTCGCCG AGGCCACCGG CGAACCGGCG
GTCCCGCACC AGCCGTGGGA TACCGCGGGC CGCCGCTACC GGGCCGAACG CGACCGGACC
CGCTGCGAGG GCATGTCCGC CGGTCACCGC GTCCACGTGT CGCACACCGG GTTGCGGGAC
TGGAACGTCG TCGTCCGCGA CGGCACGTTG TCTACTTTGG ATGAGTTTGG GTTCGCCGCC
GAGCTCGAAA GTGGTTTCAC CGCCGCGATG CGCGACCACC GGCACAAGCT GATGATGTTG
CGCGACAAGC ACTTGCCCCG CTGA
 
Protein sequence
MGILAERLDS LSIETSSPDG QITGVFRPTS ALSVHFRDGG YRGYTERGLE RQLAALVASA 
WARYWRARQA AVAEATGEPA VPHQPWDTAG RRYRAERDRT RCEGMSAGHR VHVSHTGLRD
WNVVVRDGTL STLDEFGFAA ELESGFTAAM RDHRHKLMML RDKHLPR