| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0039 |
|---|
| Symbol | |
|---|
| ID | 8881215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 47442 |
|---|
| End bp | 48047 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003508854 |
|---|
| Protein GI | 291297576 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAG ACGACGCCAC GTCCTTCATC CAACTGGCCC GCCGCGGCCA GCTGGTCGAG
TGCGCCATCG AACTGATCGC CGAAGTCGGC CTTGCCCAGG CATCCACGGT GCGCATCGCC
CAGCGGGCCG GAGTCAGCCG GGGCGTCCTC ACCTACCACT TCCGCGACCG GGCCGACCTC
GTCGAACAGG TCATCGCCCG GGTCTACGAC CTGGGCGCCG AATTCCTGCT GCCCCGCATG
CGAGCAGCCA CCTCCCCCCG CGAATCCCTG CTGCTGTTCA TCGGCGGCAG CGTCGAGCTC
TACGCCGCCC ACCCGGTCCA CATGGCGGCC CTGGCGGCGA TCTTCGGGGC CTCGACCGGC
GACGCGGGAG TGGAACGCGC CCGACACCAA CGCCACTCCC AGGAAATGCT CGACCTGGGC
CGCATACTCC ACGAAGGACA ACAACGGGGC CAGTTCCGCC AGTTCGACGT CACGGTCATG
TCCCGCACCA TCCGAGGCGC CCTGGACGCC GCCCTGGCCC ACATCGCCGC GGGCGGCGAC
GTCGAACCCT ACGCCACCGA ACTGCGAACC ATCTTCGACG CGGCGACGCG AACGGAGCCG
TCCTGA
|
|---|
| Protein sequence | MPKDDATSFI QLARRGQLVE CAIELIAEVG LAQASTVRIA QRAGVSRGVL TYHFRDRADL
VEQVIARVYD LGAEFLLPRM RAATSPRESL LLFIGGSVEL YAAHPVHMAA LAAIFGASTG
DAGVERARHQ RHSQEMLDLG RILHEGQQRG QFRQFDVTVM SRTIRGALDA ALAHIAAGGD
VEPYATELRT IFDAATRTEP S
|
|---|
| |