Gene Mrub_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_3001 
Symbol 
ID8881120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp3038859 
End bp3041030 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content70% 
IMG OID 
Productprimosomal protein N' 
Protein accessionYP_003508765 
Protein GI291297367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.380738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.338473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTCT TGAAGGTTGC CCTGCCCTTG CCGCTCGAGC CGATGACCTA CCTGCCCCCG 
CACGCCGACC CTCGAGCGGA GGTGCTGGGC TACCGGGTGG TGGTGCCCTG GCGCGGCGAG
CTGCGGGTGG GCGTGGTGGT TGGGCGCGAA GAAGCTCCCC AGAAAGCCTT TGCGCTGCGG
GAGGCCCTGG CCTACCTCGA CGCGCAGCCC TGGCTGAACC CTGCAGCCCT CGAGTTTCTA
TTGTCCGCCG CCCGCGACAG CTTTTGTGCG GTGGGCGTTT TGCTCAACGA CCTGCTGCCC
TTCCTCGAGC CCCCCCTTAC CCACCGGGTG CGGCTTGTGC CCGGGGCCGA CCCGGCGGTG
CTACCCGGAG GCCTGGAAGC CCTGGCCGCA GGCTGGCAGG AGGCCCAGGG CCTCGATCCC
AAGCTGCTGG ATTTTTTGCG TGAGGCCGGG GTTTTGCAGG AGGAGGTGGC TGAGCGGCGC
ACCCCGGCCC AGGCCCTGGT GGTGTTGCGC GAACCCGCGG AGGGCCTGAG CGAGAAGGCT
AAAGCGGCCT GGTATGCCCT GCGCGACCTG CGCCAGGTGG AGAGCATGGC CGCGCTGGCT
CGAGCCGCCG GGGTGGGGGT GGGGGTGGTG AAGGGCCTGC TCGAGAAGGG CTATATCGGG
TTTGTGGAGG TAACGCCGGC CCTCGAGGCC GTTGCGGCGC GCGCGCTCGA GCCCCTGGAA
CTGCCCCTGT CGCCGGTGCG GCTGCAGGGG GGGCGGCTGT TGGAGCGGCT GCGGGCCCTG
GCGGGCCTGG TGCAAAAGGG CCCGGCCCTG CTGCTCTTTC CCGAGGTCTC GCTGCTCAAA
AAATGCCAGC CCTTCTTCCC CGAGGCCGCC GTTTTACACG GCGAGATGAA AGCCGAGGAG
CGCCGCTTGG TGTGGGGAAG GCTTATTCAG GGGGCGGCCA GGTGGGTGCT GGCGACCTAT
CAGGGGCTCT TGCTTCCGCT CGACTGGGAA CGCATCGTGG TGGTGGAGGA GGCCGCCGAG
GCCTACAAGC TTCCGGGGGG CTCGAGGGCC TTCGTGCCCC GGCTGGCCCG GCTGCGGGCC
CAGGGGCTGG GGGTGCCCAT CCACTACTGC TCGAGCGTCA ACAGCCTGGA GGTCTGGGAC
GAACCATCCT ACCTGCTGCC CCCGCCCCAC CCGCGGCTGC ACCTGCTGGA TCTGCACCAG
GAGCGGGGCT GGCCCCTGAC CGGAGCCGCC ATCGCCCTGT TGCAGCAGGT GCAGGAGAAA
AAGCGCCAGG CCATTGTGCT CTCGGCCCGG CGGGGCTATA GCGCAGTGCT GCGCTGCAAG
CAGTGCGACT GGAAGGCTAT GTGCCCCAAC TGCGCCCTGC CCCTGCGCTA CCACAAGAGC
GGGCGGCTGG GCCTCTTGCA ATGCCACCAG TGCGGCCACG AGGAGAAAGC GCCCGAGCTA
TGCCCTAGCT GCCAGTCCGA CGTTTTCGAC CCCAGGGGGC CGGGGGTGGA GTGGCTTGTG
GAGGCCCTGG GGCGGTACCT TCCCAGCCTG CCCCGCTACC GCTACACCGC CGAGGCCAAA
GACGACCTGC GCCCCTTGCT GGCTGGCGAG CCGGGGGTGC TGGTGGGCAC CACCGCCATT
CTGCGGGGGC CGGTGCTGCC CGAGCTGGCG CTGGTGCTGC TGCCCTATGC CGATGGGTTT
GTCCTCGAGA CCGACTTTCG GGCGGTTGAG CGCTACCACC GGCTTTTGTG GCAGCTCACC
GACCTGCACC CCCAGCGCCG CCCGCTGCTG GTGTTGCAGA CCTTTGAGCC GGGGCACGCC
GCCCACCGGG CGCTCCAGGC CGCCAGCCCC CAGGGCTTTA TGGAGGTTGA GTTGGCCCTG
CGCCGCACCC TGGGTTACCC CCCGGCCAGC CGGATGGTGA AGCTCGAGGT GGCCCACCCC
AAGGAGCCGG TGGCCCGCGA TGCCATCTTT CGCTTAGCCC AGCTTCTCCA GGCCAGCGCC
GAGCCAGGCG AGCTGCTGGG CCCGGCCCCG GCCCCTGTGG CCCGTCTGCG GGGCCAGTAC
GTGTTTCACC TGCTGCTCAA AAGCTCCGAA GAGCGAGTCC GGGCCCTGAT GGCGAACCTG
CCCCCGGTGC GCGGCGCGCG GCTCAGGATA GACCCCGATC CGCAAAGCTT TGTGGGACTG
CTGGAGGACT GA
 
Protein sequence
MWVLKVALPL PLEPMTYLPP HADPRAEVLG YRVVVPWRGE LRVGVVVGRE EAPQKAFALR 
EALAYLDAQP WLNPAALEFL LSAARDSFCA VGVLLNDLLP FLEPPLTHRV RLVPGADPAV
LPGGLEALAA GWQEAQGLDP KLLDFLREAG VLQEEVAERR TPAQALVVLR EPAEGLSEKA
KAAWYALRDL RQVESMAALA RAAGVGVGVV KGLLEKGYIG FVEVTPALEA VAARALEPLE
LPLSPVRLQG GRLLERLRAL AGLVQKGPAL LLFPEVSLLK KCQPFFPEAA VLHGEMKAEE
RRLVWGRLIQ GAARWVLATY QGLLLPLDWE RIVVVEEAAE AYKLPGGSRA FVPRLARLRA
QGLGVPIHYC SSVNSLEVWD EPSYLLPPPH PRLHLLDLHQ ERGWPLTGAA IALLQQVQEK
KRQAIVLSAR RGYSAVLRCK QCDWKAMCPN CALPLRYHKS GRLGLLQCHQ CGHEEKAPEL
CPSCQSDVFD PRGPGVEWLV EALGRYLPSL PRYRYTAEAK DDLRPLLAGE PGVLVGTTAI
LRGPVLPELA LVLLPYADGF VLETDFRAVE RYHRLLWQLT DLHPQRRPLL VLQTFEPGHA
AHRALQAASP QGFMEVELAL RRTLGYPPAS RMVKLEVAHP KEPVARDAIF RLAQLLQASA
EPGELLGPAP APVARLRGQY VFHLLLKSSE ERVRALMANL PPVRGARLRI DPDPQSFVGL
LED