| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2977 |
|---|
| Symbol | |
|---|
| ID | 8881095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 3012116 |
|---|
| End bp | 3013480 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_003508741 |
|---|
| Protein GI | 291297343 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTG TCAAAGATGA CCCGAGTGGA GGTGGCGTTT TGAAGAGACT ACTCCCAACC
ATTGCAACCT TACTGGCCCT GGCCCCCCCG GTGCTAGCCC AGGGGCTTGA TCTTTCCGAT
GCGCTCAAGG CCCTACCCAG CACCCTGGAC TGGCAAAGCG CCGACCTCAG CTACGAGAGC
GCGGTGCGGC AGCTCGAGGC CGCCCTGGCC GCCCAGGGCC TCAAGCTCTC AGGTGGGGCC
GACTACACCC TGCGCGAGGG TAGCGGCAGC GGCCTGACCG TTTCCGGCAC CGCCAGCCTG
GGGGTGCTGC CCTGGTCGAG CAGCGCCGAC GCCGTGCGCA GCGCTGAGCG GGCCCTGGAG
CGGGCCGCCC TGGCCCGGCG CGAGGCCCGG AACAACCTGT ACATCGCCCT GCACACCCAG
TACTTCAACC TGCGCCAGGC CCAGGCCGAC CTGGCCCTGG CCCAGGCCAC CCTGGCCCTG
CGCGAGCGCC AGCTACAGAT TGTGACCGCC CAGAACCAGG CCGGCAGCGC CACCCTGAGC
GACCTGCTCA CCGCCCAGCA AAACCTGGAC ACAGCCCGCT CGAGCCTGCT GAGCGCCCAG
GGGGCCCTCG AGCTGGCCCG GCTCACCCTG GCGGGTACCC TGGGTCTGAA CCCCCAGCAG
CTCGGCAACC CCACCACCCC CCCTGAGGAA CCCAGCCTGC CCGATGAGGG CCTGGAAGCC
CTGCTGCAAA GGGCGCTGGC CAGCCGCCCG GATGTGCTGC GGGCTCTGTC CCAGCTTCGC
GATGCCGAAG AGAACCTGGC CAGCGCCGAG CGCAACCGGT TGATTCCCAA TGCTTCGGTT
ACCGTGGGTT ACAGCGACAG CGGCAGCACG CTCTCGGCAG GCCTGAACCT CAAAAGCGGC
ACCGCTTCGC TCTCGGCGGC CCTGCCTGTG GGCCAGGCCA CCAGCAGTAC GCTGTCGCAG
GGCTACAGCC TGGGTCTGTC GCTGAGCGTG CCCATCTTCG ACCCTGTGAG CGACAGCAGC
ATTCGCACTG CCCAGACCGC TTTGCAGGCA GCCCGGCAGG CCCTGGAAAC CGCCCGCAGG
GCCGCCGAGC TGGATGTGCG GCAGAAGTAT CAGAACCTGC AGACCGCCCA GGCCGCCATT
GCCGCAGCCA GGGCCGCTTT GAATACGGCC AACCAGAACC TGCGCACTGC CCAGGCCCGG
CTCCAGGCCG GCACCGGTAC CAGTGTGGAG GTGCAGGCAG CCCAGGTGAG CCAGCTTCAG
GCCCAGCGCA ACCTCGAGGC CGCCCTGATC CAGGCCCAAC TGGCCGCCCT GGCCCTGCAA
AATGCCCTGG GCGCCGACCT CACCGCAGCC CTTGGAGGAA AATAG
|
|---|
| Protein sequence | MRLVKDDPSG GGVLKRLLPT IATLLALAPP VLAQGLDLSD ALKALPSTLD WQSADLSYES
AVRQLEAALA AQGLKLSGGA DYTLREGSGS GLTVSGTASL GVLPWSSSAD AVRSAERALE
RAALARREAR NNLYIALHTQ YFNLRQAQAD LALAQATLAL RERQLQIVTA QNQAGSATLS
DLLTAQQNLD TARSSLLSAQ GALELARLTL AGTLGLNPQQ LGNPTTPPEE PSLPDEGLEA
LLQRALASRP DVLRALSQLR DAEENLASAE RNRLIPNASV TVGYSDSGST LSAGLNLKSG
TASLSAALPV GQATSSTLSQ GYSLGLSLSV PIFDPVSDSS IRTAQTALQA ARQALETARR
AAELDVRQKY QNLQTAQAAI AAARAALNTA NQNLRTAQAR LQAGTGTSVE VQAAQVSQLQ
AQRNLEAALI QAQLAALALQ NALGADLTAA LGGK
|
|---|
| |