| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2772 |
|---|
| Symbol | |
|---|
| ID | 8880884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 2811604 |
|---|
| End bp | 2814612 |
|---|
| Gene Length | 3009 bp |
|---|
| Protein Length | 1002 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Bifunctional DNA primase/polymerase |
|---|
| Protein accession | YP_003508539 |
|---|
| Protein GI | 291297141 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.818875 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGCC CCCTACAAGC CGCCCTCGAG TACGCCCGGC TGGGGTATGC GGTGCTGCCC
CTGCTGCCCG GTGAGAAGCG CCCACACAGC CGGTTGGCCC CTAACGGGTT GACGAACGCC
ACCCCCGACC CCGAGGTGTT GCGCCGCTGG TGGCAGGCCG TGCCCACCGC CGGGGTGGGT
ATCCTGCCCC CCGAGCAGGT GTTGGTGCTG GACTTTGACG CGCCCGAGGT GTGGGAGCAA
CTGCGGGCTG AATACCCCGA GCTAGCCACA GCCCCCCGGC AAAGGAGCCC TCGGGGTGGG
GTGCATGTCT TCCTGAAGCT GCCTAAAAGT CTGATAGGAA GCCTCACCAC CACCGCCCGG
AAGATGCCGG GGTTAGACCT GCGCGGGCTG GGGAAAGCGT ACCTTGCGGC TGCCCCCACC
GAGCTACCAA ACGGGGGCTA TAGCTGGGAA GCCCCCCTGC TGCCCCCGGC TGAACTGCCC
CTGCCCCCCG AGGGGCTGCT AAAGCGTCTG CTGCCCGAGC CCCCACCCCC ACCACCTGAG
TACCAGCCCG CGAGCTTCCG GGGTGTGAAG GGCGACAAGC TGACCCGCCG CCTGGAAGGC
CTTCTGCGCT GGGCTTGTGA GCGGGTAGCC AGTACCCCCG AGGGGCAACG CCATAACACC
CTGCTCAGTT ACGCCCGGCT GATAGGCGGC TATGTCCACC TGGGCCTCGA CCCGGAGCAG
GTCACCAGCG CCCTGGCCGA GGCTGCTATG CAGGCCGGGT TACCCCACTC CGAGGCCGAG
GCCACCGCAC GGGACGGGCT GAGGTACGGG CTGGATGCGC CGTTGGAACT GCCCGCTGAT
GAGGGCAAGG GGGATACTTT CGGGGAAGCC CCCACCTGCC CTCTGGATGG GCGCACTGGT
GGGGGGCAGG TGATGGGGAA CCCCCGCTAC AAGGTGGAGC GCGGGCAGAT TTGGGCCGCC
AAGGTAGAGG GCCGGGGTGA GTCACAGGGT GTGGCCTACT GGCCCCTGTG CAACTTCGCT
GCTGTGATTG AGCGCGAGAT AGTCGCTACT GATGGGCTCG AGACCGAGAC CCTGTTTGAA
CTTCGGGGCT ACACCTCCAC AGGCCGCCCG CTGCCTGTGG CCCTGGTGAA GTCGGGCGAG
TTTTCCGGCA TGAACTGGGT GGCCCGGCAC TGGGGGGCTG AGGCGGTGGT GCTGCCCGGT
CAGGCCAACC GGGATCACCT GCGGGCCGCC ATTCAGTTTT TGAGCCTGAG CGAAGGGCGC
ATCCGCCGCG CTACCGTGTA CCGGCATCTG GGTTGGACGA AGACAGCGGA CGGCTGGGTG
TACCTGCACG CGGGAGGTGG CATCGGGGCG AAGGGAAGCG TGACCGGGCT CGAGGTACAG
CTTGGGAAAG TATTTGAGAA CTTCGCCCTG CCCGAGCCCC CTACAGGCGA AGCTGAGCGC
GAGGCCATCA CCACACTGTG GCGGCTGTCG GAGGTGACCC CCTACAGGGT GAGCGTCCCA
CTTCTGCTCT ACGCCCTGGC TACGCCGCTG GGTCACACAC CCTTCAGCCT CTACCTGGCA
GGCCCGAGTG GAAGCCAGAA GACCTCGCTG GCCTTGGTCA TTCAATCCCT GTGGGGCTGG
CACGACAGCC CGCCCACAAG CTGGGAAGCC ACCCCCAACG CCCTGGAAGC CTACGGCTTC
ACCGCCAAAG ATGCCCTGCT GCTGATAGAC GACTACGCCC CTCAAGCGAG TGAGCAGAAA
CAGAAGGAAC TACAGGCCAA AGCCGCTCGG GTTTTGCGTT CACAGGGTAA CGCTACGGGG
CGGGGAAGAA TGCGGGCAGA CGGCTCACTG GCAGGGGATA GACCCCCTCG GGGCAGTCTG
CTGGTCACCG GGGAGGACTT ACCGCCGGGG CACTCCATTC GGGCTCGGTG TCTTTTTCTC
GAGCTCGAGC GCGGGGATGT AGACCTGCGC CGGCTCAGTG AAGCGCAACG CCAAAACCGT
GAAGGCGCAT ATGCCCGCGC CCTGAGCGCT TGGGTTCGCT ACCTCTCCGC TGACCTCGAA
ACCTACCAAC GCCAACTCGC AGACCGTACC GCTGAACTTC GCCCGCGCTG GGAATCCCAA
CACGGGCGCA CCACGGATGC CCTGGCCCGG CTGCACGCCA CCTGGGAGCT ATACCGCGAC
TACGCCGCCA CCGTGGGGGT TGACCTCGCT TATATGGATG GGCGGGTGCT GGAAGCCCTC
GAAGCAGTAC GCCGCACCCA ATCGTCCTAC CAAAGAGATT CTGACCCCAC CGAGCGCTTC
GGGGGGTTAC TCTTTAGCGC CCTTCGCATG GGCCGGGGCC ACCTGGTGCC TGTGTCTTGG
AGGCCGGGGC AATCTATAGA GGATTACCTG GACGACCCCA CCCGCTGGGG CTGGCGCTAC
CGCGAAACCA CCAGCGGCCA CCCTGACGCT CATGGGGTGT GGGAACCCCT GGGGCCACAA
ATCGGCTGGC TTCCTGACGA CCCAGACACC CTCGGGCTAT ACCTCGACCC CACCCCGGCC
TACACCGTGC TGGCACGTCT GGCGAACGAG TCGGGCGAGC CGTTACTCAC CGAGCGCACC
CTGTGGAAGC GGCTGGGGGA GCGGGGGGCT ATCCGTATTC AGGGGGACGG TCAGTCTATC
CGTTACCAAG CAGTGGTCAA GATTCACGGT AAATCCACCC GTGTTGTGCA CCTGCTAGGG
GGTTATATCT CAAAAACCGG TAACACCGGT AACCGTGCCG ATAATGGCGT GCAGGACGAG
GAAAACTCGG TTACCGGTTT TTCTTCGGTT ACCGGTACGA CCGGTAACCG GGAGCCCGCA
CCAGAACAGC GCGAAGAGAT GGTTACCGGT ACGACCGGTA ACCTGGCAGA AACCGGTAAC
CACGGGAGAG CCGTCCAGGA CGCAACAAAA ACCGGAGTTA CCGGTGTTAC CGGTTGTACA
GATATAAGGG GTAGCCACGC TACGCAAGAG GAAGAGGAAG AGGGGGGTGA CTGGGAGGTG
GTGCTATGA
|
|---|
| Protein sequence | MPSPLQAALE YARLGYAVLP LLPGEKRPHS RLAPNGLTNA TPDPEVLRRW WQAVPTAGVG
ILPPEQVLVL DFDAPEVWEQ LRAEYPELAT APRQRSPRGG VHVFLKLPKS LIGSLTTTAR
KMPGLDLRGL GKAYLAAAPT ELPNGGYSWE APLLPPAELP LPPEGLLKRL LPEPPPPPPE
YQPASFRGVK GDKLTRRLEG LLRWACERVA STPEGQRHNT LLSYARLIGG YVHLGLDPEQ
VTSALAEAAM QAGLPHSEAE ATARDGLRYG LDAPLELPAD EGKGDTFGEA PTCPLDGRTG
GGQVMGNPRY KVERGQIWAA KVEGRGESQG VAYWPLCNFA AVIEREIVAT DGLETETLFE
LRGYTSTGRP LPVALVKSGE FSGMNWVARH WGAEAVVLPG QANRDHLRAA IQFLSLSEGR
IRRATVYRHL GWTKTADGWV YLHAGGGIGA KGSVTGLEVQ LGKVFENFAL PEPPTGEAER
EAITTLWRLS EVTPYRVSVP LLLYALATPL GHTPFSLYLA GPSGSQKTSL ALVIQSLWGW
HDSPPTSWEA TPNALEAYGF TAKDALLLID DYAPQASEQK QKELQAKAAR VLRSQGNATG
RGRMRADGSL AGDRPPRGSL LVTGEDLPPG HSIRARCLFL ELERGDVDLR RLSEAQRQNR
EGAYARALSA WVRYLSADLE TYQRQLADRT AELRPRWESQ HGRTTDALAR LHATWELYRD
YAATVGVDLA YMDGRVLEAL EAVRRTQSSY QRDSDPTERF GGLLFSALRM GRGHLVPVSW
RPGQSIEDYL DDPTRWGWRY RETTSGHPDA HGVWEPLGPQ IGWLPDDPDT LGLYLDPTPA
YTVLARLANE SGEPLLTERT LWKRLGERGA IRIQGDGQSI RYQAVVKIHG KSTRVVHLLG
GYISKTGNTG NRADNGVQDE ENSVTGFSSV TGTTGNREPA PEQREEMVTG TTGNLAETGN
HGRAVQDATK TGVTGVTGCT DIRGSHATQE EEEEGGDWEV VL
|
|---|
| |