Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2743 |
Symbol | |
ID | 8880855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2781769 |
End bp | 2783298 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | type II and III secretion system protein |
Protein accession | YP_003508511 |
Protein GI | 291297113 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.230673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTT TGATTGCTCT TTTGGTGGTG TTGAGTCTGG CGCTGGCCCA GGGTACTTTG CCCAGGGATG CCCGCTTCGA CCAACCGGTA AGCAACATCG GCACCAACCT ACCCCTACCA GCCCTGCTGG ACGCGCTGGC CCGTAGCGTG GGGCTCTCCC CCATCCTGCG TGACATCCCC AACGTCAACG TTACAGCCGA CATCGACCAG AAACCCTTCC GGCAGGTCTG GGACTTGCTC ATCAACACCT ACGGCGATGG CCGCATCACC TACGCCTTGC TCGATAACAA CGTAATTGTG GTAGGGCCCA AGGAAGTGGT GGATCGGGCC CGCGGGCAGA CCGCCCAGCC CGCCCAAACC AGCGAGCCGG TAGCACGTGA GTTCTACCAG GTGCGCTCGG GCGACCCAGC CGCCCTGGCC ACCTTTGTTC AGCAGGAGGT GCCGGGGGTT ACTGTGCGGG CTGTACCCGG ACAAAATGTG CTCTCCATCA GCGGCCCCTC CCGGGCTGTA AACGACGCTC TCAACTTCTT GCAGCGCATC GATGTACCCA GGGCCACCAC AGCGACCATA CCGGTGGTGC AAAAGTCGTT TGCCCTCTCG CATGCCCGCG CCACCGAACT GGCCGATGTG CTGGGCAAGG CCATCACAGC CCAAGCCCAG GGCCAGACCA CCCCGGCTCA AGGGCAAGGG CAAGGGCAGG CCCAGCCTGC CCCGCAGGTA ACGGTGGTGG CCGAACCCCG CACCAATACC CTGATCGTTA CCGGCACAGC CGAGCAGATT GCCCTGGCCG AGCGCCTGAT TCCCAACCTG GATCGGCCTG TGCAGCAGGT GCAACTGCAA ATCCGGGTGC AGGCGGTTTC AGGTGAGGTC ATTCGCAACC TGGGTATCAA GTGGGAGACC GTCTCAGGGG GCAACCTGAT CGCCAGCTTC CTGTCCACCG GGCTCAACCT GATCTTCGAT GCCACCCGCA GCCTGGCCTC CCTTAACATC CGGGCGGTGC TGGACGCCCT GGAAAAACAG CAGCTTTCGC GCCGCCTGAG CGACGCCAAT GTGCTGGTGG AGGACAACTA CGGCGCCGAC ACCTCCGACC TGCGGGCCAC CGGGGCCAAG GGCGCGGAGA TCAAGGTGGG GGGTCGGCTG CTCATCCCCA TTACCATCGG CGATCAGATC ACAGTGCGTG AGTTCGATTA TGGCCTGCTG GTGCGGGTAC GCCCGCAAAT CTCAACCGAC GGCAACATCC TGCTCGAGGT CTTCACCCAG ACCGGCGGCG ACCCGGCTGA TGGCCCAGCC GGCAGCATCC GCATTCCGCA ACAATCCACC CTATCCAAAC TGCGCATCCG CGACGGCCAG ACCGTGGTGC TGGGGGGCCT GATTCAGAAG GTGACCGACA CCTCCGAGAC CAAAATTCCC CTCCTCGGCG ATATTCCCTT GCTGGGCGAG CTTTTCAAAC AACGCACCTC CTCGATCAAG GACGATGAGC TGATTGTGAT CATCACCGGT AACATCGTTA AGGACTCCGC CCAGCGCTAA
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Protein sequence | MKRLIALLVV LSLALAQGTL PRDARFDQPV SNIGTNLPLP ALLDALARSV GLSPILRDIP NVNVTADIDQ KPFRQVWDLL INTYGDGRIT YALLDNNVIV VGPKEVVDRA RGQTAQPAQT SEPVAREFYQ VRSGDPAALA TFVQQEVPGV TVRAVPGQNV LSISGPSRAV NDALNFLQRI DVPRATTATI PVVQKSFALS HARATELADV LGKAITAQAQ GQTTPAQGQG QGQAQPAPQV TVVAEPRTNT LIVTGTAEQI ALAERLIPNL DRPVQQVQLQ IRVQAVSGEV IRNLGIKWET VSGGNLIASF LSTGLNLIFD ATRSLASLNI RAVLDALEKQ QLSRRLSDAN VLVEDNYGAD TSDLRATGAK GAEIKVGGRL LIPITIGDQI TVREFDYGLL VRVRPQISTD GNILLEVFTQ TGGDPADGPA GSIRIPQQST LSKLRIRDGQ TVVLGGLIQK VTDTSETKIP LLGDIPLLGE LFKQRTSSIK DDELIVIITG NIVKDSAQR
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