Gene Mrub_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2090 
Symbol 
ID8880199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2130537 
End bp2131808 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content63% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003507864 
Protein GI291296466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000307561 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT GGCTTTTAGG CGCATTGGCC CTGACCCTTA TGTTGGGTGG GCTGGCCTTC 
GCCCAGGGGG TAACCATCCG CGTGGCGGGC GACTCCACCG CGGTGGGTGA AGGCGGCCGC
TGGATGAAGG CCAAAGCGGA AGAATGGGCC CAAAAAACCG GCAACAAGAT CGAGTACATT
GACTCCCCCG CCGATACCAA CGACCGTCTG GCCCTGTACC AGCAATACTG GGCAGCCCGC
AGTGCCGACG TGGACGTGTA CATGATTGAC GTGATCTGGC CTGGCATTGT GGCTCCCCAC
GCGGCCGATC TCAAGCAGTT CTTTACCGAG GCCGAGCTGA GCCAGTTCTT CCCCCGCATC
ATCGAAAACA ACACCATTCG GGGCAAACTG ACCTCAATTC CTTTCTTCAC CGATGCGGGC
TTGCTCTACT ACCGCACCGA CCTGCTGCAA AAGTACGGGT ACCAGCGCCC GCCCCAGACC
TGGACCGAGC TTGACCAGAT GGCCACCAGG ATTCAGGCCG GTGAGCGCCA GGCCGGCAAC
CGCGATTTCT GGGGGTTTGT CTGGCAGGGC AAGGCCTACG AAGGCCTGAC CTGCGATGCG
CTGGAGTGGA TCTTCTCCAT GGGCGGCGGC CGCATCATCG AGCCCGATGG CCGTATTACT
ATCAACAACC CTCAGGCTAT TGCTGCTCTC AACATGGTAC GGAGCTGGGT GGGCCGCATC
TCCCCGCCGG GGGTGACCAG CTACGCTGAA GAGGAAGCCC GCAACGCCTT CCAGTCGGGC
AACGCCGCCT TTATGCGCAA CTGGCCCTAT GCCTACAGCC TGGGCCAGAC TGAGGGCAGC
GCTGTGCGCG GCAAAATTGG GGTAACCGTG CTACCCCGCG GGGCGGGCCA GGAGGGCCGG
CACGCCGCGA CCCTGGGTGG CTGGCAGTTG ATGGTCTCGG CCTACTCGCG CAACCAGCGG
GTTGCTGCTG ATCTGGTCAA GTACCTGACC AGCGTGGAAG TCCAGAAGGA CAACGCCATC
AGCCTTTCGC GCCTGCCCAC CCGCCCGGCC CTCTACAACG ACCCCCAGGT GCTGGCTAAG
AACGCCTTCT TCAAAGACCT GCTGCCGGTC TTCCAGAACG CCGTGGGCCG TCCTTCAGGT
GTGGCGGGTG CCCGCTACAA CCAGGTCTCT GAGGCCTTCT GGACGGGCGT GCACGAAGCC
ATCACCGGGC GCAAGCCCGC AGCCCAGGCT GTGCGGGACA TGGAAGCCGC CTTCCGGCGC
ATTCTGCGCT AA
 
Protein sequence
MKKWLLGALA LTLMLGGLAF AQGVTIRVAG DSTAVGEGGR WMKAKAEEWA QKTGNKIEYI 
DSPADTNDRL ALYQQYWAAR SADVDVYMID VIWPGIVAPH AADLKQFFTE AELSQFFPRI
IENNTIRGKL TSIPFFTDAG LLYYRTDLLQ KYGYQRPPQT WTELDQMATR IQAGERQAGN
RDFWGFVWQG KAYEGLTCDA LEWIFSMGGG RIIEPDGRIT INNPQAIAAL NMVRSWVGRI
SPPGVTSYAE EEARNAFQSG NAAFMRNWPY AYSLGQTEGS AVRGKIGVTV LPRGAGQEGR
HAATLGGWQL MVSAYSRNQR VAADLVKYLT SVEVQKDNAI SLSRLPTRPA LYNDPQVLAK
NAFFKDLLPV FQNAVGRPSG VAGARYNQVS EAFWTGVHEA ITGRKPAAQA VRDMEAAFRR
ILR