| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1937 |
|---|
| Symbol | |
|---|
| ID | 8880046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1994809 |
|---|
| End bp | 1996335 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | GMP synthase large subunit |
|---|
| Protein accession | YP_003507713 |
|---|
| Protein GI | 291296315 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000000487266 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCG TTATCCTCGA TTATGGCTCT CAGTACACCC GTTTGATCGC CCGGCGCATC
CGTGAGCTAC GGGCTTATTC GGTTATTTTG CCGGGAACGG CTAGCCTGGA GCGCATTCAG
GCCGAACGTC CGCAGGCCCT TATTCTTTCA GGGGGGCCAG CCTCGGTGTT CGAACCCAAC
AGTCCGCGCC CCGCGCCAGG GGTGCTCGAG CAGGGCTGGC CCGTCCTGGG CATCTGTTAC
GGAATGCAGT ACCTGGCCCA GTACTTTGGA GGCAGGGTTG AGCGGGCTGG GCGGCGCGAG
TACGGCAAGG CCAACCTGGT GCACCACACC GGCCCTTTAT TTGCTGGCCT CGAGGGGGAG
CTACAGATGT GGATGTCCCA CTCCGATGCC GTTACCGAAC TACCCCCAGG CTGGCAGGTG
ATTGCCAGCA CCGAAGAGAA CCCGGTGGCC GCTATTGCCG CGCCCGATGG CCGAACTTTT
GGGGTGCAGT TTCACCCCGA GGTGGTGCAC AGCCCCAAAG GGATGCAGGT GCTGGAGAAT
TTCCTCGAGC TGGCGGGGGT GGTCCGCGAC TGGACGGCCC AGCACACCCT GGAGCACCTG
ATCGCCGATA TCCGGGCGAA GGTTGGGGAC GAAAAAGTGC TGCTGGCTGT TTCAGGCGGG
GTGGACTCAT CGACCCTGGC CCTGCTTCTG GCTCGAGCCA TTGGCGACCG GATGACCGCG
GTGTTTGTAG ACCATGGCCT GCTGCGCCTG GGTGAGCGCC AGGAGGTCGA GCAGGCCCTG
CGCCCCCTGG GGAAAGCCCT GCGGGTTGTA GAGGCTTCCG GGCAGTTTCT CTCGGCCTTG
CGAGGGGTGA CCGATCCCGA ACAGAAACGC AAGATTGTGG GGCGCGAGTT TATCCGGGTC
TTTGAGCGGG AAGCCCGGCA ATTGTCGGCC CAGGGCTATA GATGGCTGGC CCAGGGCACC
CTGTACCCCG ATGTAATCGA GTCAGCGGGT AGCGGCGAGG GCAGCGCCAA CATCAAGAGC
CACCACAACG TGGGGGGCCT GCCCGAGGAT TTGCAGTTTG AGCTGCTCGA GCCTTTCCGC
TATCTGTTCA AAGACGAGGT GCGGGAGCTG GCCTTGCTGC TGGGCTTGCC CGAGCCCATT
CGGATGCGCC ACCCTTTCCC CGGGCCAGGC CTGGCAATTC GCATACTGGG GGAGGTGACC
CCACAAAAAC TGGAGATTCT ACGCCGGGCC GACGACATTT TTATCTCCAG CCTGCGCGAC
TGGAACCTGT ACGACCAGGT CTCACAGGCG GCTGCCATCC TGACCCCTAT GCAAAGCGTG
GGGGTGGTGG GGGACGAACG GAGCTATGGC TATGTGCTGG GTTTGCGGGC GGTCTCCACC
GTGGACTTTA TGACCGCCGA CTGGGCCCGG CTTCCCCTGG AATTCTTAGA TGAGGTGGCC
CGCAAAATCA CCCGCCAGGT GCCGGAGATT GGGCGGGTGG TTTACGACAT CACCAGCAAG
CCACCGGCTA CCATTGAGTG GGAATGA
|
|---|
| Protein sequence | MSVVILDYGS QYTRLIARRI RELRAYSVIL PGTASLERIQ AERPQALILS GGPASVFEPN
SPRPAPGVLE QGWPVLGICY GMQYLAQYFG GRVERAGRRE YGKANLVHHT GPLFAGLEGE
LQMWMSHSDA VTELPPGWQV IASTEENPVA AIAAPDGRTF GVQFHPEVVH SPKGMQVLEN
FLELAGVVRD WTAQHTLEHL IADIRAKVGD EKVLLAVSGG VDSSTLALLL ARAIGDRMTA
VFVDHGLLRL GERQEVEQAL RPLGKALRVV EASGQFLSAL RGVTDPEQKR KIVGREFIRV
FEREARQLSA QGYRWLAQGT LYPDVIESAG SGEGSANIKS HHNVGGLPED LQFELLEPFR
YLFKDEVREL ALLLGLPEPI RMRHPFPGPG LAIRILGEVT PQKLEILRRA DDIFISSLRD
WNLYDQVSQA AAILTPMQSV GVVGDERSYG YVLGLRAVST VDFMTADWAR LPLEFLDEVA
RKITRQVPEI GRVVYDITSK PPATIEWE
|
|---|
| |