Gene Mrub_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1906 
Symbol 
ID8880014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1965044 
End bp1966603 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content65% 
IMG OID 
Product2-isopropylmalate synthase 
Protein accessionYP_003507683 
Protein GI291296285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.115585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000778681 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGCACA TCCGAATTTT CGATACCACC CTGCGGGACG GCGAGCAGAG CCCTGGTGTA 
GCCCTTTCCC TCCAGCAGAA GCTGGAAATC GCCCATGGGC TGGCCCGGCT CAACGTGGAC
ATCATCGAGG CGGGCTTCCC GGTGAATGGG GCCAGCGAGT TCGAGTGTGT CTCGCGCATC
GCCGCCGAGG TCAAGGGGCC GGTGATCTGC GCCCTGGCCC GCACCCACAA GCTCGACATC
GAGCGGGCTG CGGCGGCCCT CGAGAAGGCC GAGAAAAAGC GCATCCACGT GTTTACCAGC
GCCTCCAAGG TGCACCTGCA GTACATGCTG CGCAAGACCC CGGAGGAGAT ATTGGAAATT
TCCGACGCCA TGGTGCGCTA CGCCCGGCAG TTCACCGACG ACGTGGAGTT TAGCGCCCAG
GACGTAATGC GGGCCGACTT CGACTTCGTC ATGAAGCTCT ACGAGACCGC CATCAACGCC
GGGGCCACCA CCATCAACAT CCCCGACACC ACCGGCTACG GCACCCCGCA GGAGTACGGG
GCCCTCATCA AGCGCATCTA CGACGAGGTG GTGCGGGGAC GGGATGTGCA CATCTCGGCC
CACTGCCACG ACGACCTGGG CATGGCCACC GCCAACAGCC TGGCCGCGGT GGAGAACGGG
GCCACCCAGA TCGAGTGCAC CATCAACGGC ATCGGGGAGC GGGCGGGCAA CACCGCGCTG
GAAGAGGTGG TAATGGCTTT GTACGTGCGC CGCGACCACT ACAAGGCCCA TACCCAGATC
AACACCCGCG AGCTGTACCG CATGAGCCGG ATGGTGGAGC GCTACACCGG CATGGTGGTG
CAGCCCAACA AGGCCATCGT GGGGGACAAC GCCTTCGCCC ACGAGTCGGG CATCCACCAG
GACGGGGTCA TCAAGAACAA AGAGACCTAC GAGATTATGA ACGCCGAGCT GGTGGGCCGC
CAGGCCGCGG TGCTGGTGCT GGGCAAGCAC TCCGGGCGGG CCGCGGTCAA GAAAGCCCTG
GCCGACCTGG GTTACAAGCT GGACGACACC CAGATTGGCG CGATTTTTGC CCGCTTCCGG
GAGATTGTGG AGCGCAAAGG CCCCATCGAG ACTGAGGAAC TGCGGGCCCT GGTGGAGAGC
GAGTCGGTCT CGACCCCGCA CCTGTTCAAC CTCGAGAAGC TCCAGTTCTT CTCCGGCTAC
GGCATGCTGC CCACCGCTAC GATAAGCCTC GAGACCCCCA AAGGCGTGGT CACCACCACC
GCGATTGGGG ACGGGCCGGT GGACGCGGTG TATAAGGCCC TGTCCGAGGC CATCGGGTTC
AAGCCCGAGC TCGAGCTGTA CCGGGTGGAG TCGGTAACCG GGAGCACCGA GGCTTTGGGT
GAGGTCACGG TCAAGCTCAA GTTGGGCGAG GTGATGGCCA CCGGGCACGG CATCTCCCCG
GACATCATCG AGGCTTCAGC GCGGGCCTAC CTGGATGCCG CCAACAAGCT GGCCGCGGGG
CAGTCGGCGC GGCATCCGAA GTCGCTCGAG GAAGTGCAGC GCTCGGGTTT GGGCAAATAA
 
Protein sequence
MRHIRIFDTT LRDGEQSPGV ALSLQQKLEI AHGLARLNVD IIEAGFPVNG ASEFECVSRI 
AAEVKGPVIC ALARTHKLDI ERAAAALEKA EKKRIHVFTS ASKVHLQYML RKTPEEILEI
SDAMVRYARQ FTDDVEFSAQ DVMRADFDFV MKLYETAINA GATTINIPDT TGYGTPQEYG
ALIKRIYDEV VRGRDVHISA HCHDDLGMAT ANSLAAVENG ATQIECTING IGERAGNTAL
EEVVMALYVR RDHYKAHTQI NTRELYRMSR MVERYTGMVV QPNKAIVGDN AFAHESGIHQ
DGVIKNKETY EIMNAELVGR QAAVLVLGKH SGRAAVKKAL ADLGYKLDDT QIGAIFARFR
EIVERKGPIE TEELRALVES ESVSTPHLFN LEKLQFFSGY GMLPTATISL ETPKGVVTTT
AIGDGPVDAV YKALSEAIGF KPELELYRVE SVTGSTEALG EVTVKLKLGE VMATGHGISP
DIIEASARAY LDAANKLAAG QSARHPKSLE EVQRSGLGK