| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1722 |
|---|
| Symbol | |
|---|
| ID | 8879828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1776379 |
|---|
| End bp | 1777443 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_003507503 |
|---|
| Protein GI | 291296105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTT GGTTCTTTGT GCTGGCGCTA TCGGTAGGAA CCGCTGTGGC GCAGCAAAAC
CCTACCCAGC CCGCACCCAA GCCGCAGACT CAGGCCAACC TATGCCTCCT GCTCTATGAG
GCGGGGCGCC CCGAAGCCGC CCTACCGGCC TGCGAGCGCG CTGTTAAGGA CGCACCCAGC
GCAGAAAACC TCTACCTGTT GGCCCGTGTG CAGTCCGATC TGAACCGCTT TACTGCGGCC
ATCGAAAACC TGCGCCGCTC AATCACCCTT AACAGCAGCT ATATCCAGTC TTACGTGGCG
CTGGCCCAGG TGTATGTACG CCAGTACCTC CTATCGGAGA ACCGCGAGGC CAGCAAGGGC
TTGCTGGATC AGGCCCTGAG CGTACTGCGC GAAGCCGAGC GGGTCAACGC CAAGTACGCC
CCCATCTACG CAACCCGCGG CACGGTGTTG GCTTACCAGA ACAAGCTCGA CCAGGCTGTG
GAATCCATCA ACCGCTCACT GGCCCTGAAG GACGAACCGG TTGTTCGGGC TTTGCTGGCC
GATATCTACA TTCGGCAAGG CAAGTGGGAT GAGGCCCTCA AACACTACGA CGAGGCGGTC
AAGGCGGCCC CCAAAAACCC CAGCCTGCGC ATCAAATACG GCAGCCTGTT GCTGCTCAGG
GGCAATGTGG ATTTAGCCAT TGAGCACCTC GACCAGGCCG TAATCCTGAG CCCCGGCAAC
GCCGAGGCCT GGCTGCGCCG GGGTGACGCT TACTACGAGA AGAAGGACTG GCAGCAGGCC
GGGGTCTCCT ACCAGCAGAC CGTGGCCCTC TCGCCGGTTC GCTATCCGGA TGCCTATATT
GGCCTGGGCC AGGTGCTGAT CGAGCTCAAG GATTACCAAA AGGCCCGGTT CAACTTCACC
AAGGCTGTTG CCCTGGAGCA GAACAACCCG GTTTACCGCT ACTGGCTGTG TCGCGCCAAC
GAACTGCTGG GAGACAAGGC CGGCGCAAAA GAGCAGTGCG AGCAAGCCCT CAAGCTGCGG
CCCGACCTCA AAGAAGCCCA GGAAGTACTT AATCGCTTAA AGTAA
|
|---|
| Protein sequence | MRFWFFVLAL SVGTAVAQQN PTQPAPKPQT QANLCLLLYE AGRPEAALPA CERAVKDAPS
AENLYLLARV QSDLNRFTAA IENLRRSITL NSSYIQSYVA LAQVYVRQYL LSENREASKG
LLDQALSVLR EAERVNAKYA PIYATRGTVL AYQNKLDQAV ESINRSLALK DEPVVRALLA
DIYIRQGKWD EALKHYDEAV KAAPKNPSLR IKYGSLLLLR GNVDLAIEHL DQAVILSPGN
AEAWLRRGDA YYEKKDWQQA GVSYQQTVAL SPVRYPDAYI GLGQVLIELK DYQKARFNFT
KAVALEQNNP VYRYWLCRAN ELLGDKAGAK EQCEQALKLR PDLKEAQEVL NRLK
|
|---|
| |