Gene Mrub_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1309 
Symbol 
ID8879405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1341257 
End bp1342885 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content53% 
IMG OID 
Productbacteriophage N4 receptor, inner membrane subunit 
Protein accessionYP_003507091 
Protein GI291295693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.140023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATT TTATTGGAGC AGTATTGGTG CTGGTCTGCT TTGGATACCT TGTTGCCATC 
TTTGACGACC TGATTTTCGA TGCGGCCTAC CTGTTTCGAA GACGCCGTTT TCAGCAGGCC
GGTCTTTCGA AGGAGGAACT TGAAAGCGAC AACCCCAAGC GCATCGCAGT AATGGTGGCA
GCCTGGCAGG AAGCTGGGGT GGTGGCCAAG ATGGCGAAGG CCACGTATCG TCTAATGCGT
TATCCGGAGG ATCGGATCGA GTTTTTTATT GGGGTATACC CCAACGACGA GGCCACGTTG
CATGAAGTAC GCGAACTGTC CAAGAGCAAC CCTCGAGTAC ATTGCGTAGT TAATCAGAAA
CCGGGGCCAA CTAGCAAAAG CCAGAACCTT AATGAGGTTT TTGCCTTTAT CCAAGACCTC
GAGAACATCC GGAATCAGGC GTTTGATGTT ATTGCTCTAC ATGACGCAGA GGACGTGATT
CACCCTTATG CCTTTCGCTT CTACAGCGCC CTGCTTAGCC GCCATGACAT GGTGCAATTG
CCGGTGATTG CCATGTTTCC CAGGCTGCCC TGGTGGCGGT GGCTAAACCG CATTGTTTCC
GGCACTTATG CCGACGAATT TGCAGAGAGC CACCTTCACC ACATGCCGAT ACGCGAGGGG
TTTGGCTTGT TTGTGCCCAG TGCTGGTACC GGCTTCGCTT TGCGACGAGA AGTGGTGAGC
TTTTTGGCGG CTGAAGGCCC GGTTTTCCGA GAGGGAAACC TGACCGAGGA TTACGACATG
TCGTTGCGCT TGTGGCAAAA AGGCTTTCGG GTGCACTTCC ACGTGCAGCG GCTCAAGCGC
ATAGATGATC GAGGCCGGGT TTGCAACGAG GTAGTGGGAA TTAAGGAGTA CTTTCCTTTT
GAAATACCGG CTGCTGTAAA GCAAAAGGCG CGCTGGATTT ATGGCATTAC CATGCAGAGC
CCCAAGGAGA CTGGCCTCAA AAGACTGCGC TTAAAGGAAC GACTGATACT CTGGCGTGAT
TGGAAGGGGA AATATACCAA CCTGATCCAT TTTGTGGGCT ATCCACTGGC TTTGTACTCT
GTACTGGCCT ACTTCCTCGA CTGGCCGCAT GCAGATCCCC GGTTAATGCT GGTGCTCAGT
GGTGGTGTTC TGCTGATCAC CCTCGAGCGC CTCCTGATGC GCTTTGCTGC AATCAAATCT
GTATATGGGG TAGCCGAAGC ACTACAGGCC ACCGTGGTGC TGCCATTGTT TCCCTTGAGG
TGGTTTGTGG GAAACATCAT CAATGCTCTG GCTACTCTGA GGGCCTGGCG TATGTACTTC
TGGCCCGCTC GAGGGGCCCG CAAAGGTGCG ACCCCAGTTT GGGATAAAAC CGAGCGCAAG
AGCTATGTGC CTGCTGAGGT GCTTGAGTCT GTTCGCCGTC GCTTGGGGGA TGTGCTGCTC
TTTTACGGTG ATGTAAGCCC CCAAGAGCTG GCTTTAGCCT TGCGCACAAA GCCTTCCGGA
GTGCCCTTGG GTGAAATTTT ATTGCGCAAC CAAACGCTTG ATCCCGATCG CCTCAGGCTG
CGCATTACCG AGACCCAGGA ACGCCTGCAG AACGAATCCA AAGTATCAGC CATTACAGCG
AATAAATGA
 
Protein sequence
MPDFIGAVLV LVCFGYLVAI FDDLIFDAAY LFRRRRFQQA GLSKEELESD NPKRIAVMVA 
AWQEAGVVAK MAKATYRLMR YPEDRIEFFI GVYPNDEATL HEVRELSKSN PRVHCVVNQK
PGPTSKSQNL NEVFAFIQDL ENIRNQAFDV IALHDAEDVI HPYAFRFYSA LLSRHDMVQL
PVIAMFPRLP WWRWLNRIVS GTYADEFAES HLHHMPIREG FGLFVPSAGT GFALRREVVS
FLAAEGPVFR EGNLTEDYDM SLRLWQKGFR VHFHVQRLKR IDDRGRVCNE VVGIKEYFPF
EIPAAVKQKA RWIYGITMQS PKETGLKRLR LKERLILWRD WKGKYTNLIH FVGYPLALYS
VLAYFLDWPH ADPRLMLVLS GGVLLITLER LLMRFAAIKS VYGVAEALQA TVVLPLFPLR
WFVGNIINAL ATLRAWRMYF WPARGARKGA TPVWDKTERK SYVPAEVLES VRRRLGDVLL
FYGDVSPQEL ALALRTKPSG VPLGEILLRN QTLDPDRLRL RITETQERLQ NESKVSAITA
NK