Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1309 |
Symbol | |
ID | 8879405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1341257 |
End bp | 1342885 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | bacteriophage N4 receptor, inner membrane subunit |
Protein accession | YP_003507091 |
Protein GI | 291295693 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.140023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGATT TTATTGGAGC AGTATTGGTG CTGGTCTGCT TTGGATACCT TGTTGCCATC TTTGACGACC TGATTTTCGA TGCGGCCTAC CTGTTTCGAA GACGCCGTTT TCAGCAGGCC GGTCTTTCGA AGGAGGAACT TGAAAGCGAC AACCCCAAGC GCATCGCAGT AATGGTGGCA GCCTGGCAGG AAGCTGGGGT GGTGGCCAAG ATGGCGAAGG CCACGTATCG TCTAATGCGT TATCCGGAGG ATCGGATCGA GTTTTTTATT GGGGTATACC CCAACGACGA GGCCACGTTG CATGAAGTAC GCGAACTGTC CAAGAGCAAC CCTCGAGTAC ATTGCGTAGT TAATCAGAAA CCGGGGCCAA CTAGCAAAAG CCAGAACCTT AATGAGGTTT TTGCCTTTAT CCAAGACCTC GAGAACATCC GGAATCAGGC GTTTGATGTT ATTGCTCTAC ATGACGCAGA GGACGTGATT CACCCTTATG CCTTTCGCTT CTACAGCGCC CTGCTTAGCC GCCATGACAT GGTGCAATTG CCGGTGATTG CCATGTTTCC CAGGCTGCCC TGGTGGCGGT GGCTAAACCG CATTGTTTCC GGCACTTATG CCGACGAATT TGCAGAGAGC CACCTTCACC ACATGCCGAT ACGCGAGGGG TTTGGCTTGT TTGTGCCCAG TGCTGGTACC GGCTTCGCTT TGCGACGAGA AGTGGTGAGC TTTTTGGCGG CTGAAGGCCC GGTTTTCCGA GAGGGAAACC TGACCGAGGA TTACGACATG TCGTTGCGCT TGTGGCAAAA AGGCTTTCGG GTGCACTTCC ACGTGCAGCG GCTCAAGCGC ATAGATGATC GAGGCCGGGT TTGCAACGAG GTAGTGGGAA TTAAGGAGTA CTTTCCTTTT GAAATACCGG CTGCTGTAAA GCAAAAGGCG CGCTGGATTT ATGGCATTAC CATGCAGAGC CCCAAGGAGA CTGGCCTCAA AAGACTGCGC TTAAAGGAAC GACTGATACT CTGGCGTGAT TGGAAGGGGA AATATACCAA CCTGATCCAT TTTGTGGGCT ATCCACTGGC TTTGTACTCT GTACTGGCCT ACTTCCTCGA CTGGCCGCAT GCAGATCCCC GGTTAATGCT GGTGCTCAGT GGTGGTGTTC TGCTGATCAC CCTCGAGCGC CTCCTGATGC GCTTTGCTGC AATCAAATCT GTATATGGGG TAGCCGAAGC ACTACAGGCC ACCGTGGTGC TGCCATTGTT TCCCTTGAGG TGGTTTGTGG GAAACATCAT CAATGCTCTG GCTACTCTGA GGGCCTGGCG TATGTACTTC TGGCCCGCTC GAGGGGCCCG CAAAGGTGCG ACCCCAGTTT GGGATAAAAC CGAGCGCAAG AGCTATGTGC CTGCTGAGGT GCTTGAGTCT GTTCGCCGTC GCTTGGGGGA TGTGCTGCTC TTTTACGGTG ATGTAAGCCC CCAAGAGCTG GCTTTAGCCT TGCGCACAAA GCCTTCCGGA GTGCCCTTGG GTGAAATTTT ATTGCGCAAC CAAACGCTTG ATCCCGATCG CCTCAGGCTG CGCATTACCG AGACCCAGGA ACGCCTGCAG AACGAATCCA AAGTATCAGC CATTACAGCG AATAAATGA
|
Protein sequence | MPDFIGAVLV LVCFGYLVAI FDDLIFDAAY LFRRRRFQQA GLSKEELESD NPKRIAVMVA AWQEAGVVAK MAKATYRLMR YPEDRIEFFI GVYPNDEATL HEVRELSKSN PRVHCVVNQK PGPTSKSQNL NEVFAFIQDL ENIRNQAFDV IALHDAEDVI HPYAFRFYSA LLSRHDMVQL PVIAMFPRLP WWRWLNRIVS GTYADEFAES HLHHMPIREG FGLFVPSAGT GFALRREVVS FLAAEGPVFR EGNLTEDYDM SLRLWQKGFR VHFHVQRLKR IDDRGRVCNE VVGIKEYFPF EIPAAVKQKA RWIYGITMQS PKETGLKRLR LKERLILWRD WKGKYTNLIH FVGYPLALYS VLAYFLDWPH ADPRLMLVLS GGVLLITLER LLMRFAAIKS VYGVAEALQA TVVLPLFPLR WFVGNIINAL ATLRAWRMYF WPARGARKGA TPVWDKTERK SYVPAEVLES VRRRLGDVLL FYGDVSPQEL ALALRTKPSG VPLGEILLRN QTLDPDRLRL RITETQERLQ NESKVSAITA NK
|
| |