Gene Mrub_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1290 
Symbol 
ID8879385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1320124 
End bp1320615 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_003507072 
Protein GI291295674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.382466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.245973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA ACTGGTTGTT TGTCGTAATG CTCCTAAGCT TGCTGTTGGG CGGTTCGCTC 
ATCGCACAAA ACCGTACCAC CCCCACCCGC ATCGGTTATG TGGACGCCGA AAAGGTGGTG
CAGGCCCACA AGGACTTCAA AAAAGTGCAG GATATCCGTA ACCAGGCCGA GCGCGAGCTG
AAACCCTTAC GCGATCAGCT CCAACCCCTC GAGGCCAAGC TGCGGGCCGG CAATGCCACC
GCCAAGGATC AGCAGGACTA CCGGGTGCTG GCCCAGAGCC TGCAAGAAGC GGGCAAAAAG
TGGAGCGACC GGACCAACGC CGCGCTCAAA CCGATTACCG AGGAGATCGA TCAGGTGATT
GCACGGGTCG CCCAGCAGCA GGGTTTTGCC ATGATATTGG ACAAAAAAGT GGCGGCCACC
AGCGGTCTGG TGGTTTATGC TGCCGACGAA CTCGAGATCA CCGATGCGGT GATCAAAGCC
CTTCCTAAGT AA
 
Protein sequence
MSKNWLFVVM LLSLLLGGSL IAQNRTTPTR IGYVDAEKVV QAHKDFKKVQ DIRNQAEREL 
KPLRDQLQPL EAKLRAGNAT AKDQQDYRVL AQSLQEAGKK WSDRTNAALK PITEEIDQVI
ARVAQQQGFA MILDKKVAAT SGLVVYAADE LEITDAVIKA LPK