| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1257 |
|---|
| Symbol | |
|---|
| ID | 8879352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1283146 |
|---|
| End bp | 1283628 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_003507039 |
|---|
| Protein GI | 291295641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCACA TCGACCAGGA GATCGCGGAG GAACTGGGCT TTGGTCTGGT GCCCAATGTC
TTTGCCTATG CGCAAAGCTC CGAACTAAAA GCGGCCTTAT GGAAGGCTTT CCGCCACGTG
GTGCTACGAG GGCTGCTGCC CCGAACAGTC AAGGAGATGA TGGGGGTGCT CGTCTCGCGG
GCCAGGGGTT CGAGCTACGC CGCCGAGGTG CACCTCCACG CCTTGATGGT GCAGGGCACC
GAGACCGCGC TGCTGGAGGC GCTGCGGCGT GGGGAGGTGC CTTCGGGCCT GCCGGGTAAG
GTACAGGCCT TGCTGGCTTT CGCCCACAAA GCGGCCACGG CCCCCGATCC AGGGCTGCTG
GCGGGCCTGC GCCAAGCCGG GCTGAGCGAG GCTGAGGTGC AGGAGGCGGT AGCGGTGGTG
GGGCTTTTTG CGCTGGTCAA CACCTGGACT GATCTGCTTG AGATTCCTGT AGACCCCCTG
TGA
|
|---|
| Protein sequence | MEHIDQEIAE ELGFGLVPNV FAYAQSSELK AALWKAFRHV VLRGLLPRTV KEMMGVLVSR
ARGSSYAAEV HLHALMVQGT ETALLEALRR GEVPSGLPGK VQALLAFAHK AATAPDPGLL
AGLRQAGLSE AEVQEAVAVV GLFALVNTWT DLLEIPVDPL
|
|---|
| |