Gene Mrub_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1009 
Symbol 
ID8879098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1001557 
End bp1002045 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID 
Product16S rRNA processing protein RimM 
Protein accessionYP_003506794 
Protein GI291295396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0144074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.267558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCA TCGAAATTGG ACGCATCGGA AAAGCCTACG GCATGGCGGG GGGCCTCAAG 
TTTCGGGGAG AGCCGGTGAT TTTTGACCTC GAGCGCATCT ACCTCGAGGG CCTGGGCTAC
CGCGCCATCG AAGAAATTGA AGAGCACAGC GGGGAAATCG TGCTGTTTCT AACGGGCGTG
GAGGGCCGCC AGGAAGCCGA GCAACTGGTG GGTTTGCGGG TCTATGCCGA TCAGGCCGAC
CTACCCCCGC TGGAAGAGGG CGAGTACTAC TACTTCGAGC TGATAGGCCG GCCGGTTTTT
GTAGACGGAC AGCCCTTCGG TGAAGTGGTG GATGTCGAAG ATGGTGCGCA GGAACGGCTT
ATCATCAAAG CCAGGGGCGC TTCTTTACGA GCCCAGAGCA AAACCTATAT GGTGCCCTTT
CAGGCCCCAT ACGTGAAGGT GGAGGCCGAT GGTATTTATA TCGAATCCAT CCCCGGGCTG
CTCGATTAG
 
Protein sequence
MRRIEIGRIG KAYGMAGGLK FRGEPVIFDL ERIYLEGLGY RAIEEIEEHS GEIVLFLTGV 
EGRQEAEQLV GLRVYADQAD LPPLEEGEYY YFELIGRPVF VDGQPFGEVV DVEDGAQERL
IIKARGASLR AQSKTYMVPF QAPYVKVEAD GIYIESIPGL LD