Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0730 |
Symbol | |
ID | 8878811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 700739 |
End bp | 702559 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | UbiD family decarboxylase |
Protein accession | YP_003506516 |
Protein GI | 291295118 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.999695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATAAGA ACCTCCAGGC CTTCATTCAC GAACTCGAGC GCCGCCAGGA GCTCGTTCGC GTCAAGGAAC CGGTCTCCTG CGAACTGGAA ATCACCGAGA TTGCCGACCG AATGGTCAAG TCGGGCGGCC CGGCCCTGCT GTTTGAGAAT GTAGAGGGGC GCGACTTCCC GGTTTTCATC GGGGGTTTTG GCACCGCCGA GCGCACCGCG CGGGCCATGG GCGTGAAAAG CCTGGACGAC CTGGCGGTGC GGGTGGCCAA CCTGATGAAC CTCAACCCCG GCAAGGGCGG CCTCAAGGCG GCCCTCGCTA TGCTGCCCAA GCTGCGGGAA CTCAAGGGCT TCTTCCCCAA AAAAGTGCGC GGCGGGCCGG TGCAGGAGGT GGTCTGGAAA GGCGACCAGG TAGACCTCTT CCGAATTCCC ATCCTCAAGT GCTGGCCCCT GGACGGCGGC CCCTACATCA CCCTGCCGCT GGTGATCTCC AAAGACCCGG AAACGGACGA GCTTAACCTG GGCATGTACC GGATGCAGGT GCTGGACAGG CGAAGCACCG CCATGCACTG GCAATTGCAC AAGGTGGGTC GGCGGCACTA CGACAAAGCC AAAAAACTGG GGAAGCGGCT GGAAGTGGCG GTGGCCCTGG GCGGCGACCC CATCCTGACC TACGCTGCCA CCGCCCCTGT GCCCCCCATT CCGGGCGTCA ACGAGTTCAA CCTGGCGGGG TTCTTGCGGG GCCAGCCGGT CGAGCTGACC CGCGGTGTCA CGGTAGACCT GCCGGTGCCC GCCGAGGCCG AGTTCGTGCT CGAGGGCTAC ATCGACCCCG CCGAAGACCT GGTAGTGGAG GGGCCTTTCG GCGACCACAC CGGCTTTTAC ACCCTGGAAG ACCTCTACCC CCGCTTCCAC CTCACCGCCA TCACCCACCG CAAAAACGCC GTCTACCCGG CCACCATCGT GGGCCGCCCG CCCATGGAGG ACGCCTACCT GATCGAGGCC TCCGAACGGC TCTTTCTGCC CGCGGCCCAG CTCATCCTGC CGGAGATCCA CGACTACCAC ATGCCGCCCG CCGGGGTGGC CCACAACTGG GTGAACGTGA GCATCGAGAA GCGCTACCCC GGCCAGGCCT ACAAGGTGGC CAACGGCCTG TTTGGGCTGG GCCAGATGAT GTTTGCCAAG GTGATCGTGG TGCTGGATGC GGGCGCTCCT TTGAAGGGGC CCGAGGCCCT GCAAAAAGCC CTCGAGCACG CCGTGCCGGG GCGCGACACC CTCATCTCGC GCGGCCCCAT TGACGTGCTC GACCATTCCT CCCGCGCCAT GGGCTACGGG GGCAAGCTGA TTGTGGACGG TACGGCCAAG CTCGAGGAGG AAGGCGGCGC CCTGCCCTTT ACCCTCCGGG CCCACCCCAG CCTGCCGGGT ATTCCGGGGG TGCGGCAGAA GCAACTGCCG GGCATCTGGA TGGTCACCTT CGAGAAAACC CGCCCCCACC AGGCCAAAGA GCTTGCCGAG CGCCTGCTGA TAGCCCCCCA GAGTGCGGGC ATTCGGCTGA TGCTCCTGAC CGATGCCGAC ACCCACCTCG AGTTCGACGA GGTGATGTGG GCAGTGCTCA ACAACATTGA CCCCGAGCGC GACGCCTGGG TGTTGCCGGG GGTGGAGGGC CCGGTGCTGG TGCTGGACGG CACCCGCAAG CTGGCCGAGG AGGGCTTTAC CCGCCGCTGG CCGCCCAAAA TCGTGATGGC GCCCGAGATC GTGCGCCGGG TAGACGAGCG CTGGAACCGC CTGGGGCTGC CCCCGTTGCC GCCCAGGGAT ACCCCGGTCG GCCAGTCCTG A
|
Protein sequence | MYKNLQAFIH ELERRQELVR VKEPVSCELE ITEIADRMVK SGGPALLFEN VEGRDFPVFI GGFGTAERTA RAMGVKSLDD LAVRVANLMN LNPGKGGLKA ALAMLPKLRE LKGFFPKKVR GGPVQEVVWK GDQVDLFRIP ILKCWPLDGG PYITLPLVIS KDPETDELNL GMYRMQVLDR RSTAMHWQLH KVGRRHYDKA KKLGKRLEVA VALGGDPILT YAATAPVPPI PGVNEFNLAG FLRGQPVELT RGVTVDLPVP AEAEFVLEGY IDPAEDLVVE GPFGDHTGFY TLEDLYPRFH LTAITHRKNA VYPATIVGRP PMEDAYLIEA SERLFLPAAQ LILPEIHDYH MPPAGVAHNW VNVSIEKRYP GQAYKVANGL FGLGQMMFAK VIVVLDAGAP LKGPEALQKA LEHAVPGRDT LISRGPIDVL DHSSRAMGYG GKLIVDGTAK LEEEGGALPF TLRAHPSLPG IPGVRQKQLP GIWMVTFEKT RPHQAKELAE RLLIAPQSAG IRLMLLTDAD THLEFDEVMW AVLNNIDPER DAWVLPGVEG PVLVLDGTRK LAEEGFTRRW PPKIVMAPEI VRRVDERWNR LGLPPLPPRD TPVGQS
|
| |