| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0522 |
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| Symbol | |
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| ID | 8878599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | + |
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| Start bp | 504255 |
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| End bp | 506540 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirD4 protein |
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| Protein accession | YP_003506317 |
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| Protein GI | 291294919 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.155716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGA CCCGGCGGCA GTCGTTGCTC GAAGTGCCCA CCTCCCAGAA GCTCCTGCGG
TTTCTGGGAG GTCTGGTAAT GCTCTCCACC CTGGCCCTGG CCTTCGGGGT TGGATGGCAG
GCCGCGCTGG AGGTGGCCCA GGGGATGCTG CGGGCGGGGT GGGGAGCCGC GCTGAAGGCG
TCGAGCCCTG CCGAGCTGAT CCTGCGCTGC TACGGTGACC TGACCGGCAA CTGCACGGAG
GTCATGAACG GCCTGTGGCA GAAGGCCCTG CCCCTGGACA CCCTGCGGAT GGTGGTGGCC
GGGGGGTTTG TCCTGGGGAT GATCCCCTTC CTGATCCGCC CGCACCGCCC GCGCAAGCTG
CCGGGGCAGG GGCGGTGGGC CAGCGCCAGC GACCTGAAGG GTTACTTAGG GGAGGGCACC
GGCTGGTACG GGCTGTTCGA GGGGAAGCCG CTCAGGGTGC CCTCGATGGA GCGGCGCACC
GGGACGCTGG TGGTGGGCAA GCCCGGCGGG GGCAAAACGA CCGGCTACTA CCAGCCCAAC
TTGCTGCTCG ACGCGCGGGA CGGCTGGAGC GCCATCGTTT TCGATCTCAA GTGGCCCGAC
GAGGGCGGGC TGATGGAGGC GATACGCTAC TACAGCCACT TCGGGCGGGC GGTGTATGCC
TACACGCCCT TCGCGCCGGG CTCGGCCCGC ATTGCCCTGC TGGAAGGTGC GGAGAACCCC
CAGGAAGCCA GCAACATCGC GGACATCATC GTGCCCCGCC TGGCCGACGG GGGGGCGGAG
TTCTACGCCA ACCTCGAGCG GATGCTCCTG GCCGGGTTGA TATGGGTGGA GGGGCAGGAA
GGGCGCTACT CCCTGCGGCA CATCCTCGAA CTGTTGCGCC AGGGCAAGGA GGAGATCAAA
GCCTACGCCG AAGTCCGCCC ACATCTGAAG GACCGGATCG GAGCGGTCAT GCAGACCCGC
GAGGACATCA TCGCCGGGGT GGTGGCAGGG CTGGCAGGCA GGCTGGCCCT CTTCGAGAAC
GACCATTTGG ATCGCTCGAG CCTGCCGGGT GCAGGGGCGG TGCCCTGGCC TCGCCTGTTC
AGCGAGCCCA GCCTGCTTTA CATCGGCATC CCCCAGGAGC ACCTGGAAGG GGGCAAGGCC
ACGGCCCTCT TGTGGCTGGT CAAGCGCATC CTGGACCGGG AAATCCACCG GGCTGCTGCC
CGGAACGGGG GGACGCTTAA AGCGCTCACC TCGGTCTACC TCGACGAGTT CACCGCCTTC
GGCAAGCTCC CCGGCATCGA GGACAACCTC AAGACCATGC GCAGCAGGGG AGCGGCCTTC
CACGTGAGCG TGCAGAACCT GGCCAACGGG CGCTCGGTAT ATGGGCGGGA TGTGTGGGAG
AGCATCCAGG GGACGTTCGG GCAGCAGGTG TATCTGCTCG AGCGCCTCTC GGAGGAAGAC
CGCAAATGGC TGGCCCGGAC GCTGGGGTAC GAGACCGTGG TGGGATACTC CAGAAGCGCC
TCCAAAATGG GCTTCCTCTC GGGCAGCGAG GGGGAGGGCG AGCGCGAGGA GGCCCGCTTC
CTGCTTTCCG CCGAGGAGAT GCGGGAGGTG AAGAAAGGCG AGACGGTGGT GATCCTGGAC
GGCAAGCCGC CGGTGCGCAC CTACCTGGGG GGGATGTGGG AGAAAAAACA CCCCCTGCAT
GGGCTCTACG AGAAGGCCCG GAAGGCTGTC CCGGCAGTGC GGGCGGGAGC CGCCCGGGAC
AGGGCCTACG CCGAACCCCA GCCCCGGCCT GCTTCCTCTT CCGTGGAAGA GCGCCAGCCT
GAGCCTGAAC GCCAGCCCGT CGAGCTCCAG CCAGAGGAGC GTTCTCTGGT GCAGGAGGCC
AGCGATCCCC GCAGCCTGGA AGCCTACATC CGGCGACTGG CCTCCACCCT GCCGGTCTTC
CAGCGCTACT ACCACAAGAA GACCACCACC GGGATTCGCT TCGTGCTGCC CGCGGGCTTC
CCCCCACCCG AGACGGCCTG GGTGCGGGAG GGCTGGATCG AGGTGCGGGG CAAAGAGGAA
CTCTCGGTCA ACCTCACCAG CAAGGGCCTG GAGACCCTGG AAAAGACCTT CGTGGCGGCC
CTGGTGCGCT GGTGCCGGGT GCGGGAGTGG GCCCGGCGGC AGAACCAGGA ACGCCAAAGC
CTGCTCTATA TGAGCGAGGA GGAAGCCGAG ACCGTGCTCA GGGAGTACGC CAAACAACTT
CCCACGGAAG GGGGGCGGGT GAGGGTCGAG ATTTCATTGG AGGCGTTGGG CGATGCAAGG
GCTTGA
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| Protein sequence | MSVTRRQSLL EVPTSQKLLR FLGGLVMLST LALAFGVGWQ AALEVAQGML RAGWGAALKA
SSPAELILRC YGDLTGNCTE VMNGLWQKAL PLDTLRMVVA GGFVLGMIPF LIRPHRPRKL
PGQGRWASAS DLKGYLGEGT GWYGLFEGKP LRVPSMERRT GTLVVGKPGG GKTTGYYQPN
LLLDARDGWS AIVFDLKWPD EGGLMEAIRY YSHFGRAVYA YTPFAPGSAR IALLEGAENP
QEASNIADII VPRLADGGAE FYANLERMLL AGLIWVEGQE GRYSLRHILE LLRQGKEEIK
AYAEVRPHLK DRIGAVMQTR EDIIAGVVAG LAGRLALFEN DHLDRSSLPG AGAVPWPRLF
SEPSLLYIGI PQEHLEGGKA TALLWLVKRI LDREIHRAAA RNGGTLKALT SVYLDEFTAF
GKLPGIEDNL KTMRSRGAAF HVSVQNLANG RSVYGRDVWE SIQGTFGQQV YLLERLSEED
RKWLARTLGY ETVVGYSRSA SKMGFLSGSE GEGEREEARF LLSAEEMREV KKGETVVILD
GKPPVRTYLG GMWEKKHPLH GLYEKARKAV PAVRAGAARD RAYAEPQPRP ASSSVEERQP
EPERQPVELQ PEERSLVQEA SDPRSLEAYI RRLASTLPVF QRYYHKKTTT GIRFVLPAGF
PPPETAWVRE GWIEVRGKEE LSVNLTSKGL ETLEKTFVAA LVRWCRVREW ARRQNQERQS
LLYMSEEEAE TVLREYAKQL PTEGGRVRVE ISLEALGDAR A
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