| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2876 |
|---|
| Symbol | |
|---|
| ID | 8829288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013930 |
|---|
| Strand | + |
|---|
| Start bp | 229779 |
|---|
| End bp | 230984 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | plasmid-related protein |
|---|
| Protein accession | YP_003494827 |
|---|
| Protein GI | 290243157 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0061217 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC AAAGCGACAA CCCACCCCTG AAGGCCACCG AGGTAAAAAG TATGGCCGAA
GGGAACTGGG AAACCGTCTT TAGCACTGTG CTAAGAGGCG ATCTCGAAGA GGCAATGCGA
AGGGCACCCA AGCATGTCCC GAATCCGAAG CTCGGAGGAA CGGATGGGTT CCGACTCATG
AAGAACTGGA AAACGGACGG TAGTGCAGTT GTGAACACCG TTGATTCGGA TCTTGAGGAG
ATCGGCGCTG GCAAGGACCG AAACGTCCTG AGCAATGGCG TGGATGTCAT CGTATGGCTC
CGACCAGAAT GGACGTTCCG GGAAGTGCTG GATGCGATCG TGGACGCCCT GGGCGGACGC
GAGGTAGCCG AAGGCAGGAT CAATGATCCG GCCATGCAAG CGGAGATCGA GAAACGGAGG
AAGGAGCTGG CAGAACGGCA GAAGAAAAAG GATGAAAACG CAAAGCAGCA GCTGAATCGG
ATCTGGTCAG GGACTCTACC CCTGGACAGC GACGAAGCGG CGGTGGCGCG TACCTACCTC
GAGAACCGAG GGATTTATCT GATGGATCTG CCGCCTGTTA TGCGCTTTCA CCCCAAACTG
GGAGTTTGGG ACCACGAGAA GCGAAAAGTC GTCAGGACGT TACCGGGGTT CGTCTCAATG
CTCCAGCAGG AGGATGAATT ACCGGGATCG CTTCACCGAA CGTTCCTTGA ACCGGACGGG
TCTGGTAAAG CCCAGATGCC GAACGGAGAT AGTGCGAAAA AGCTGTGCAG TACACCGAGC
GACGTCACCC TGACGGGCGG CGCCATTCGG TTGTTCGAGC CGGAGGAAGG GCAGGATATT
CTCCACGTCA CGGAGGGTAT CGAAAGCGCT CTCTCAGTCC GTTATGGACT CGGAGAGGCC
GAGCCTGTAT GGGCGCTCTA CTCTACTTCG CTTCTGGCTT CATTCAATCC GCCGGATTGG
GTGCGCTATC TGGTGATCTG GGCGGATGTG GACCTTGAAA AAGGCCGCAA CAAAACCCGT
GCCGGCGAAG GCGCAGCCGA TCGCCTTATG GGACGTCTCC AGAAGGATCG AGGCATTAAG
GTGTCGGCGG CCTATGCCGC CCCGGAAGTA CCCGAAGGCA TGGATTCCTA TGACTGGAAC
GACGTGCTCA TCGAGTATGG ACCGCGGGCG ATCATGGACC TGCGACACAA GATGACCTTC
CGTTAA
|
|---|
| Protein sequence | MSNQSDNPPL KATEVKSMAE GNWETVFSTV LRGDLEEAMR RAPKHVPNPK LGGTDGFRLM
KNWKTDGSAV VNTVDSDLEE IGAGKDRNVL SNGVDVIVWL RPEWTFREVL DAIVDALGGR
EVAEGRINDP AMQAEIEKRR KELAERQKKK DENAKQQLNR IWSGTLPLDS DEAAVARTYL
ENRGIYLMDL PPVMRFHPKL GVWDHEKRKV VRTLPGFVSM LQQEDELPGS LHRTFLEPDG
SGKAQMPNGD SAKKLCSTPS DVTLTGGAIR LFEPEEGQDI LHVTEGIESA LSVRYGLGEA
EPVWALYSTS LLASFNPPDW VRYLVIWADV DLEKGRNKTR AGEGAADRLM GRLQKDRGIK
VSAAYAAPEV PEGMDSYDWN DVLIEYGPRA IMDLRHKMTF R
|
|---|
| |