| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2860 |
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| Symbol | |
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| ID | 8829272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | - |
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| Start bp | 214686 |
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| End bp | 216161 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003494811 |
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| Protein GI | 290243141 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.898794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.474728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGATTC TCAATCGGAC AGACGGCTCA ACACAGCGCC TGGGGGAACT ACTCATTGAG
CGCGGCCTTC TCAGTTCCGG CGCGCTGGAT GCCTCACTGA CCGAACAGCG CCTGACGGGG
GAGCGCTTGG GCCGGATCAT GGTTCGCAAT GGCTTCGTGA CACGTAAGCA GCTGCTCGCG
ACGCTGGCGG ACACGGAGAA CCCGGAAGTC CTGTCGGAGC CGTTTGAATC CGACCGCGTC
CCTCCTGAAG TTCTCCTTGA ACTTAGAACC ATGCTGCTGG GGGATACCGG CGACCGGCTC
CTGCTTGCCT CGGACGCTCC TCGCTGGTGG GTCGAGCGGG TTCTTGGGCC GTATTTCCCC
GGCCATCGAA TGATCTGGAT GGATTTTGAT CCCGAGATCC ACGCGCGGCA CTTGGAGCTG
CTGGCGGCCT ATACGTCGGA GACCGTCCTG GATCGACTTC TCCGCCGTGC GGTGATGGAA
GGGATCTCGG ACATCCACCT GATCCCGAAG CCGGCCGCGT ACACCGTGAT GTACCGGCGC
CTCGGTGTTC GCCAGATCAT CGAGGATCGC ACGCGGGAAG AGGGCATCCG CATGGTGGCC
CAGGCCAAGG ACCGCGCCAA AGTCGATATT GCGGAGACCT CAGTGCCCCA AGATGGCGCC
TTTCGTCTTG CGATGCTCGA TCGCAGCGTG GACTTTCGGG TTGCCACCAT CCCCGAGACC
GATGGCGAGA AGCTCGTTAT CCGGGTACTG GACCCCGAGG CTGCGTATCC CGAACTCGAG
GCACTTGGAA TGCGCGAAGT GGACACCTGG ATGGATGCAG CCGCCCAGCC GCACGGGATC
TGCTTGATCT GCGGCGCCAC CGGATCCGGC AAGTCCACCA CTCTCAATGC AACCTTGCGG
CGCCTCGATC GGTTCGGCAT GTCCATCCAG ACTGTCGAGG ACCCAGTCGA GCATCAGTTG
TCGTTCGTTG GTCAAGTCGA GGTCAACCGG GGCAGGGGAC TGGATTTCAC CCGGGCGCTT
CGCGGCTTTA TGCGTGCCGA CCCGGACGTG CTCATTGTTG GCGAGATTCG CGACCGCGAG
ACGGCGGAGC TGGCGGTGCA GGCGGCGGAA ACCGGGCACA TGGTGTTCGC AACGCTCCAC
ACCGACTCTG CCGCCGGCGG CCTAACCCGG CTTCGGGACC TTGGAGTTCC GATTGCCGAC
TTCGCACCTC TGGTGCGTGC CACTATGGCT CAGAAACTCA TCCGCGTAGC GTGCCCTCAC
TGTCACGGCA AGGGGTGCGA TGCTTGCGAA GGGATTGGCT ATTCTGGCCG GACCCTGATC
TCCGAGGTCG CGCCATTCAG GGGTCCACAG GATGTCGAGC GCGCCCTGAA TGGGGAGACC
TGGTGGACCT CTTTAAGGGA AGACGGGGAA GCGCGGCTGC GCGAGGGTTC CACCACCGAT
GACGAGATTC GACGGGTCCT GGGGAGCGGC CTGTAA
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| Protein sequence | MQILNRTDGS TQRLGELLIE RGLLSSGALD ASLTEQRLTG ERLGRIMVRN GFVTRKQLLA
TLADTENPEV LSEPFESDRV PPEVLLELRT MLLGDTGDRL LLASDAPRWW VERVLGPYFP
GHRMIWMDFD PEIHARHLEL LAAYTSETVL DRLLRRAVME GISDIHLIPK PAAYTVMYRR
LGVRQIIEDR TREEGIRMVA QAKDRAKVDI AETSVPQDGA FRLAMLDRSV DFRVATIPET
DGEKLVIRVL DPEAAYPELE ALGMREVDTW MDAAAQPHGI CLICGATGSG KSTTLNATLR
RLDRFGMSIQ TVEDPVEHQL SFVGQVEVNR GRGLDFTRAL RGFMRADPDV LIVGEIRDRE
TAELAVQAAE TGHMVFATLH TDSAAGGLTR LRDLGVPIAD FAPLVRATMA QKLIRVACPH
CHGKGCDACE GIGYSGRTLI SEVAPFRGPQ DVERALNGET WWTSLREDGE ARLREGSTTD
DEIRRVLGSG L
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