| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2834 |
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| Symbol | |
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| ID | 8829246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 190947 |
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| End bp | 192023 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003494786 |
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| Protein GI | 290243116 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.433586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCG GCCTTGAAGG CCGTTATCGG CGAGTGATGG CGAAGTTGGC CTTCGGTGCC
AGTAAACGTG CGGATATGTA CGAAGATCTG GCGGCCTTCC AAGAGGCGGG AATCCCGCCC
TTTGACGCGC TCAAGTCTGT GAATGATGTC CATCGAAAGC GACGCAATCC GCTGGCCTAT
ATGACGGACG AATGGATCCG GGTCATGGAA GGGGGCGGCA CGCTGGCGGA CGCGATGGTG
CCCTGGGCCG ACTCTGCGGA AGTGGCGATG ATCGCTTCAG GGGACCGCTC TGGTGAGCTT
CAGGAGGCTT TGGTTGAGGT GTCGAAGCTC ACTCGTGCGC GGCACGAGAT GATGGCCGAG
GCCGCTCAGA AGCTGACCAT GCCAATGGTA ATGATCGCCG CCCTGTTCGG GCTCGTGTAC
TACATTGCGA TCACCATCGT CCCTACAGCA CAGGATCTCC TCCCGGAAGA ACACATGCCA
GCATTCGCGG GGGGGTACTT CGCGTTTGGC GCGTGGGTGC TCTCGTACGG CCCCGTTGTA
GTAGTGGCTC TGGTGGGGGC GATGATCGCG CTGTTGGTCT CGCTGCCAAT ATGGGCTGGC
CCGAAACGCG ACCGTGTGGA CCGGTGGTTC CCTTGGACCC TCTACCGTTC TCTCCAGAGT
GCATTCTTTA TGATCACGCT CTCCGCCATG ATCCGCTCTG GAATGCCCAC GGCAAAAGCT
CTTACGGAGT TGCGAGAATA CGCCAGACCA TGGATGCGAC GTCACCTGGA TCGCATGCTG
AACAGCCTGC GCCAGGGGCG ACGTGAGACT GAGGCACTGG ATTCGGGGTT GCTGATGGAT
GCCATGAGTG ACCGGCTGTA CATCTACAGT CGACTCCCCG ATTTCTCGGT GGTAATGCAA
GCCATCGGGA TCGATGCGAT GAAGGGGTTG AAAAAGACCA TCAACCGGTT TGCGACCCTG
ACATCGATTT CCGTCATGCT TTTGCTGGCG GTGTTCATCC TGGTCACGGT GTTCGCTCTC
GGCGAGACCA GTTTCGCCAT TTCGGAGGCG GTCGAGCAGC AGTCGAGCGG CATTTGA
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| Protein sequence | MLRGLEGRYR RVMAKLAFGA SKRADMYEDL AAFQEAGIPP FDALKSVNDV HRKRRNPLAY
MTDEWIRVME GGGTLADAMV PWADSAEVAM IASGDRSGEL QEALVEVSKL TRARHEMMAE
AAQKLTMPMV MIAALFGLVY YIAITIVPTA QDLLPEEHMP AFAGGYFAFG AWVLSYGPVV
VVALVGAMIA LLVSLPIWAG PKRDRVDRWF PWTLYRSLQS AFFMITLSAM IRSGMPTAKA
LTELREYARP WMRRHLDRML NSLRQGRRET EALDSGLLMD AMSDRLYIYS RLPDFSVVMQ
AIGIDAMKGL KKTINRFATL TSISVMLLLA VFILVTVFAL GETSFAISEA VEQQSSGI
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