| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2830 |
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| Symbol | |
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| ID | 8829242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 184782 |
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| End bp | 186437 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003494782 |
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| Protein GI | 290243112 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.218706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCAT GGAAGAAGGC AGTCCTCGCG GCAGCGGTGG CAGTGGCGAC TACTGGGTGC
GCAGGTTTCG GTGAGACCAC CGAGACGGTG CAAAACAGTG AGCGCCAGAC CAGCGAAACG
CGTCAGCAGA TTGATCAGTT GGAAGCAGAG CGTGTGCGAG CGAATGAAGG TACGCATGAG
AGGGCCCGGA CGCCTGGCGC TGGCGATGAC CTGTACCTGA ATACCTCGGC GGTGCCGATT
CGCAAGACGT TGCCGCCGGC ATTCGAGCGT CAGGTGACAT TCCATGAGCC GTACCCCACC
CCGATTGGCA GTGTGATGTC CAAGCTGTCG GAAGTGACGG GGCTCCAGGT GGGGTTCGAG
TACGACCTGG TAGATCCTGG TGCGAATCAG GGTAACCAGG GTGGGGATCG GGTCGACTCG
GCGGGCGATG ACGTCGGCGT AGTCGATCTG GATGAGCTGG TCGGCGGCCG CGTACATCAA
GCGGATCTGC TGCATGACGT GGAGATTTCG CTGTCCCATC AGGGGCGAGT GCGCGACGTG
CTGGATGCAG CAGCGAACAC GCTCCAGGCG AACTGGCGCT ACGACGAGAA TTCCAACCGA
GTTGTCTTCT ACCGATATGT CACCAAGACC ATGCGGGTTG CGATGACCCC GGGGAAGATG
ATTAACGACG TGCTCATTGA GACGCAGAGC GACGGTTCTC GCAGCGGTGG CGCGGAAAGC
AACCTGCGCC TGGAAGGCGA AAGCTCGGTG TGGGAGAGCC TCGAAGACGC GCTGGGCACG
ATGGTTTCAA GCCGGGGGGC GTTCTCGGTG TCCGATACCA CCGGAACGAT CACGGTGCGA
GACGTGCCGG ACGTGGTGGA CCGCGTGAGC GACTACGTCG ACAACATGAA TGACACGTTC
TCGCGCCAAG TCTCTGTGGA TGTGCAGATC TATCGAGTCG AGGCGACCGA GAATGAGCTT
CGGGGCGTCA ACTGGAATGC CCTGTTCAAC AACAACAACA TGGAGTTTGA GGTCAGCTCG
CCGGGTGGCA ATGCCTCTGG CGATGTTTCC CCCGGGGGGG TACGGCTATC TGTTCCGGAC
GGAGCGGGGA CGCTGAGTAA TCTCGTGGGC AGTGAAGGAT TCATTGCGAG TCTCGAGGAG
ATCGGCGATG TATCGGAGGT GACATCGACG ACGCTTCAGA CGGTCAATAA CCAGCCCGCA
CCGGTACGGA TTGGTCAGAC TGTTTCCTAC CTGGAAGAGG TTTCGCAGAC CGATACCGCG
AACGTGGGCT CGCAGGCATC GCTCACGCCG GGCGAGGTCG ACGTTGGTTT CAGTATGCAG
CTGCTTCCGC ATGTTCAGGA CAACGGCCGC GACATGCTCA TGCAAGTGAT GATCACGCTG
TCGACATTGG ACCGCCTTGA GGAATTCAGT TCCGGTGACC AGACGATCCA GCTCCCCGAG
GTTTCCAGCC GCGACTTCGT GCAGCGGACT TGGCTGCAAA GCGGTGAGGC ACTGGTGCTG
GCTGGCTTTG AATCCATTCA GGCCAACCTT GCTCGAAGCG GCATCATTGA CGCGGATAAG
TGGGCGCTGG GTGGGAACCG CAGGGCGGAA AACACCCGCG AAAGCCTGAT CATCGTGATG
ACGCCGACCG TGACCTCTAT TCAGGACCGG TTCTAA
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| Protein sequence | MIPWKKAVLA AAVAVATTGC AGFGETTETV QNSERQTSET RQQIDQLEAE RVRANEGTHE
RARTPGAGDD LYLNTSAVPI RKTLPPAFER QVTFHEPYPT PIGSVMSKLS EVTGLQVGFE
YDLVDPGANQ GNQGGDRVDS AGDDVGVVDL DELVGGRVHQ ADLLHDVEIS LSHQGRVRDV
LDAAANTLQA NWRYDENSNR VVFYRYVTKT MRVAMTPGKM INDVLIETQS DGSRSGGAES
NLRLEGESSV WESLEDALGT MVSSRGAFSV SDTTGTITVR DVPDVVDRVS DYVDNMNDTF
SRQVSVDVQI YRVEATENEL RGVNWNALFN NNNMEFEVSS PGGNASGDVS PGGVRLSVPD
GAGTLSNLVG SEGFIASLEE IGDVSEVTST TLQTVNNQPA PVRIGQTVSY LEEVSQTDTA
NVGSQASLTP GEVDVGFSMQ LLPHVQDNGR DMLMQVMITL STLDRLEEFS SGDQTIQLPE
VSSRDFVQRT WLQSGEALVL AGFESIQANL ARSGIIDADK WALGGNRRAE NTRESLIIVM
TPTVTSIQDR F
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