| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2815 |
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| Symbol | |
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| ID | 8829227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 170268 |
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| End bp | 172115 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | type IV conjugative transfer system protein TraD |
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| Protein accession | YP_003494767 |
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| Protein GI | 290243097 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGT CGCATGACGA GTACGAAGTC CCGTTTCGTC CGAACTTCGA GCTGAGGAGC
GCGGCCGCGT GGGCCGTGGC GGCCGGTGGC TGCGTGTTGG CCGGGTGGAT GATCGCTGCG
CCAGCCGGAC TCATGGTGGT CTCGGCGGGA GTCTGCCTGA TGGGGGCGGC TTACCGAGGC
GCACAGGGTT TCCCCCGTTT GCGGGAATAC CAGCGGGTCC GTAGCGGCAA GCTGGAATTT
ACGGACATGA AGGAGCTGCT GAGCAAGCAG AAACCCGACG CCTTGTGGAT CGGCCGGGGA
TACGAGTGGG ACAAGACGGC CGCGAATCGG GCGTATTCGA TCTGGCGCCG CGGGGTCGAG
AATGTCCTGG GAAAGGTCGA TACGGCCACT GGTGGGGCCT TCTGGATGCA GGGGCTCAAG
CGGGTGGAGG ACCTGTACGT CAAGACGAAG TTTCTCGAAG GGCATACGTT GATTGTAGGC
ACGACCGGTG CTGGCAAAAC ACGCCTGTAC GACATCCTGC TCACGCAGCT GGTGGCCCGG
AACGAGGGTC CGGTGATCGT CATAGACCCG AAGGGTGACC ACGAGATGCG TGAGAACATG
CGGCGTGCAT GCGAGGCCAC AGGCAACCCG GAACGCTTCC AGATGTTCCA TCCGGCCTAC
GCGGACCGAT CGGTGCGCAT CGACCCGCTC AAGAACTGGA ACCGGGCAAC AGAGGTGGCG
AGTCGAATCG CGGACCTGAT GCCCACGGAG TCGGGCGGCG ACCCCTTCCA GGCGATTGCC
TGGAACGCAC TCAACTCTGG AATTCAGGGG ATGGTCGAGA TCGGCGAGAT GCCGAGCATC
GTCAAAATCC GGTCGTACAT TGAGGGTGGT CCGGGGCCGC TCCTTCGCCG CGTACTGCCC
GTTCACTTTG AACGCTGGAA CAGCGATTGG AACAACGCCT ATCGGACCTA CATGTCCGGA
AATCCGGATA TTGGCGGCGG CAAGCGCGGG CAGCAGTCGG CCGAGGACGA AGAAATCAAC
AAGATGGTGG CGTTCTACAC CGATCTAGTG GCAAAAGAGG AGCGCAGCTC GGTTCTGGAT
GGTCTCATTA CCGCCTACAA GCACGACAGG GAGCATTTCC AGAAGCTCAT CGCCAGTCTC
ATCCCGATCC TGTCCATGCT GACCTCCGAT GTTATGGGTG AGCTGTTGAG TCCCGATTAC
GAAGACATGG ACGATGACCG CCCGATCATC GATATGCAGA AGGTCATCCG TGACAACACG
GTCCTGTACA TCGGGCTGGA TTCCCTGTCG GACAAGACCG TCGGGTCGGC GATCGGTGCG
ATACTGCTGG CGGACCTCGC GGCGGTCGCG GGTGATCTGT ACAACTACGG GACGCCCGAG
ACCCGGAAGG CCATGTGGAT CTGTGTGGAC GAAGCCAGTG AAGTGCTGAA TGAGCCGGCC
GTTCGCATCC TGAACAAGGG ACGTGGGGCC GGTATGCGCG CCATGATGGC GACGCAGACA
ATGGCCGACG TGGAGGTCAG GATGGGCGGT GAGGCCGATG CGCTGCAAAG CCTAGGGAAC
TTCAACAACG GGATCTATCT GCGCGTCCGT GATGGCAAAA CACAGGAGTA CGTTACGAAA
TCGCTACCCA CCGTGCGGAT CGAGGATATG GAAACCGGGT ACCGTGAAAT GGCCGGTGAG
CTGGGTGAAA TGGAGGCCAG CAAGGCGGGG TACTCCGAAG CGCTCAAGAA GGAGGATCTC
GAGCTGATCC CACCGGCTCT TCTGGGGGAG ATCCCGGATC TCCAGTTCTT TGCGCACCTG
AAGGATGGAA GGCTGCTGAA AGTGCAGACC CCGATCCTGA CAGGGTAG
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| Protein sequence | MLTSHDEYEV PFRPNFELRS AAAWAVAAGG CVLAGWMIAA PAGLMVVSAG VCLMGAAYRG
AQGFPRLREY QRVRSGKLEF TDMKELLSKQ KPDALWIGRG YEWDKTAANR AYSIWRRGVE
NVLGKVDTAT GGAFWMQGLK RVEDLYVKTK FLEGHTLIVG TTGAGKTRLY DILLTQLVAR
NEGPVIVIDP KGDHEMRENM RRACEATGNP ERFQMFHPAY ADRSVRIDPL KNWNRATEVA
SRIADLMPTE SGGDPFQAIA WNALNSGIQG MVEIGEMPSI VKIRSYIEGG PGPLLRRVLP
VHFERWNSDW NNAYRTYMSG NPDIGGGKRG QQSAEDEEIN KMVAFYTDLV AKEERSSVLD
GLITAYKHDR EHFQKLIASL IPILSMLTSD VMGELLSPDY EDMDDDRPII DMQKVIRDNT
VLYIGLDSLS DKTVGSAIGA ILLADLAAVA GDLYNYGTPE TRKAMWICVD EASEVLNEPA
VRILNKGRGA GMRAMMATQT MADVEVRMGG EADALQSLGN FNNGIYLRVR DGKTQEYVTK
SLPTVRIEDM ETGYREMAGE LGEMEASKAG YSEALKKEDL ELIPPALLGE IPDLQFFAHL
KDGRLLKVQT PILTG
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