| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2795 |
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| Symbol | |
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| ID | 8829207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 149017 |
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| End bp | 150744 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | Procollagen-proline dioxygenase |
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| Protein accession | YP_003494747 |
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| Protein GI | 290243077 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAATG GCGAGGTAAG GATCATTGAG GGCGAGATTC CCGATTCAGT TCGGGAGGCC
GTAACGAGCT CGCTCCCGGT GGTGGCCGAG GAAGCCGAGC CGGAGAGGGT CGAACGAAAC
CGGATGCCGG CGGAACGATA CGACGGGATG GAGACGCTAT CGCAGGACCC GCTGGTGGTC
TATCTCGATG AGTTTCTGGA GCCGGGGGAG TGTGAAGCGC TCATTCATCT GGCGCAGGGC
CGCATGAAGC GTGCGCTGGT GTCGCTCGAT GGGAGTAGCG GCGTGAGTCA GGGCCGGACG
GGCTCCAACT GCTGGCTGCG CTATCAGGAA GAGCCGCTGG CGCGCCGCAT CGGAGAGCGG
GTCGCAAAAC GGGTCGGATT CCCCTTGGAA TACGCCGAGC CGCTTCAGGT TATTCACTAC
GGTCACGAGC AGGAATACCG ACCTCATTAC GATGCATACG ATCTGGATAC GCCGCGGGGA
CTGAGGTGTA CACGGCAGGG CGGACAGCGA ATGGTTACCG CATTGCTGTA CCTCAATGAG
GTCGAGGAAG GGGGTGCTAC GGCATTTCCA AACGCCGGAG TCGAAGTCGC GCCCCGCAAG
GGGAGGATCG CTATATTCAA TAATGTCGGT GCTGACCCGG GTCGCCCACA TCCACGCAGT
TTGCATGGCG GCATGCCGGT GAAGAGCGGC GAAAAGTGGG CGGCCAGCAT CTGGTTCCGC
GCCCGCCCGG CGCACGAACG GCAACCCTGG TTCGATGACG TGGAGGACGC CAGCGCCCAG
GTCCCCGAGG GCGAGGGTGG TCACTGGCCG GTAGTGGCGA GCAATCGGGC GCAAAGCATC
CTTCAGCCTG CGCTGGAGAG GGCGGCGCCG ATGCTGCCCC CGGAAGCTGG CGACGTAATG
GTCGAATACT GTGTCGGCCC GGACAATCAG CGCGAGGAAA GTTCTGAAGC GGAGGCCTTC
GGGCTTGTGG TGCGGGCGAT GCCTTCGAGC ATCACCAATG AAGCCGAGAA CAAGAAGAAC
GTCGTGCGCA AAATGAAGGA GGCCGGGCAC GCGGAGCGCA TCCCGCTCTC TTGTGATTCG
ATCAGCGACG CGATGGGGCT TCCGGGGGCT CGCGACGCCG TGTGGTTTGT CCGTCCATCG
TTTGGGAGTG CGGGACGGGG TACGCATTGC GTGCGGGGGG CGAGCCTGCG GGGGGCGAGC
CTGCATCCCC AGCAGTTCTT GCAGCTGGCG GAGGAAAGTC TACTTCTCAT CAGAGGGCGA
AAGTTTCTCA CGCGTGCATT CGTTCTGGTC TGGGGCGGGG CGGCCTACCT GTTTGATGAG
GGGTATGTGC TGATGCATGG GGCTCAGTAC CAGGTCGGGA GCACCAATGC GGCCACGCAG
ATGGATCACC GCAATGCGCA TGACCCGTCA GGTCCGCTGG TCCAGGAAGT GTTCCATGAG
GTAGCGCAGC TGAAGGACTC TCACTGGGAG GATCTGTCGG CTGCGGTTAC GGCCGTAGTG
GAGGCATTCC CGGGGCTGGC CGAAAATTCA TCGGCGACCA CGTTTGCGGT GCTCGGGGTG
GATGCGCTGT TCCGCGAGAA TGGGCACGCG CTGATCCTCG ATATCAGCAC AATGCCGAAT
TTCGTGCAGC AGCCAGCAAT CAACGACCGG GTCACGATCC CGTTGTGGGT ATCGATTTTC
GAGATGCTGG CGGGCACGGG AAGCCAGCGA TTTAAACGCA TCACTTGA
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| Protein sequence | MVNGEVRIIE GEIPDSVREA VTSSLPVVAE EAEPERVERN RMPAERYDGM ETLSQDPLVV
YLDEFLEPGE CEALIHLAQG RMKRALVSLD GSSGVSQGRT GSNCWLRYQE EPLARRIGER
VAKRVGFPLE YAEPLQVIHY GHEQEYRPHY DAYDLDTPRG LRCTRQGGQR MVTALLYLNE
VEEGGATAFP NAGVEVAPRK GRIAIFNNVG ADPGRPHPRS LHGGMPVKSG EKWAASIWFR
ARPAHERQPW FDDVEDASAQ VPEGEGGHWP VVASNRAQSI LQPALERAAP MLPPEAGDVM
VEYCVGPDNQ REESSEAEAF GLVVRAMPSS ITNEAENKKN VVRKMKEAGH AERIPLSCDS
ISDAMGLPGA RDAVWFVRPS FGSAGRGTHC VRGASLRGAS LHPQQFLQLA EESLLLIRGR
KFLTRAFVLV WGGAAYLFDE GYVLMHGAQY QVGSTNAATQ MDHRNAHDPS GPLVQEVFHE
VAQLKDSHWE DLSAAVTAVV EAFPGLAENS SATTFAVLGV DALFRENGHA LILDISTMPN
FVQQPAINDR VTIPLWVSIF EMLAGTGSQR FKRIT
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